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Clc04G11600 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G11600
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionvacuolar protein sorting-associated protein 13-like protein
Genome locationClcChr04:25158142..25159244
RNA-Seq ExpressionClc04G11600
SyntenyClc04G11600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2001331.1 hypothetical protein ES319_D12G294800v1 [Gossypium barbadense]5.3e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

KAG6584363.1 hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1963.64Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAA-------EVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTTAETAAI-----EEHKELN
        MEREKRK MSP E        + K+ KK RKEE+EAA       E+EEPTTEEVEEFYAILRRMDVALRYLKG+R+ ER+TTAETA +     +E +ELN
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAA-------EVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTTAETAAI-----EEHKELN

Query:  LNEVPSDSSN
        LNEVP+DS+N
Subjt:  LNEVPSDSSN

KGN64116.1 hypothetical protein Csa_013670 [Cucumis sativus]1.1e-2574.04Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKE-----AAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTT-AETAAIEEHKELNLNEVPS
        MEREKRK MS  E GGVVEE K++KKKK++KEE++     AAEVEEP+TEEVEEFYAILRRMD ALRYLKG+R+PER+TT  ETA   E+KELNLNEVPS
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKE-----AAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTT-AETAAIEEHKELNLNEVPS

Query:  DSSN
        DSSN
Subjt:  DSSN

TYH41367.1 hypothetical protein ES332_D12G311700v1 [Gossypium tomentosum]5.3e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

XP_040963685.1 vacuolar protein sorting-associated protein 13-like protein [Gossypium hirsutum]5.3e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

TrEMBL top hitse value%identityAlignment
A0A0A0LVR0 Uncharacterized protein5.3e-2674.04Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKE-----AAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTT-AETAAIEEHKELNLNEVPS
        MEREKRK MS  E GGVVEE K++KKKK++KEE++     AAEVEEP+TEEVEEFYAILRRMD ALRYLKG+R+PER+TT  ETA   E+KELNLNEVPS
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKE-----AAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTT-AETAAIEEHKELNLNEVPS

Query:  DSSN
        DSSN
Subjt:  DSSN

A0A5D2AII1 Uncharacterized protein2.5e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

A0A5D2IFL4 Uncharacterized protein2.5e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

A0A5D2SJS8 Uncharacterized protein2.5e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

A0A5J5P8J9 Uncharacterized protein2.5e-0457.14Show/hide
Query:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY
        ME+EKRK    E   GV  E+ KKKKKKVRK E+E   V E   EEVEEF+AILRRM   ++Y
Subjt:  MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGAAAAAAGGAAGGCAATGTCGCCGGAGGAGAACGGCGGAGTGGTTGAAGAGACGAAGAAGAAGAAGAAGAAGAAAGTGAGGAAGGAGGAGAAAGAGGCGGC
GGAGGTGGAGGAGCCGACAACGGAGGAGGTGGAGGAGTTTTATGCCATTTTGAGGAGGATGGATGTGGCTTTGCGGTACTTGAAAGGGAGGAGGCTGCCGGAGAGAAAAA
CAACGGCGGAGACGGCGGCGATTGAGGAACATAAGGAACTGAATTTGAATGAAGTGCCTTCAGATTCTTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
CGTCACTCACCGCATATATCAAAGTTTCAATCCAACGGTTGAAAACGAAAGGCCACAATTAAAATAACTGATTTAAGTAGCCTGATCATTCTGATTCGGCACACAGAAAA
ATGGTCGCTCTTACAAATCTCCGTCTCTGATTTCAACGATTTTCATCCTAAACCTCAAGAAATGCGCTGATCTTTATCTGATCAGCGCTCCGATTTAAAATTTAATCGGA
GAAGAAGGATTTGAATCTCAAGTTTCAAAATGGAGAGAGAAAAAAGGAAGGCAATGTCGCCGGAGGAGAACGGCGGAGTGGTTGAAGAGACGAAGAAGAAGAAGAAGAAG
AAAGTGAGGAAGGAGGAGAAAGAGGCGGCGGAGGTGGAGGAGCCGACAACGGAGGAGGTGGAGGAGTTTTATGCCATTTTGAGGAGGATGGATGTGGCTTTGCGGTACTT
GAAAGGGAGGAGGCTGCCGGAGAGAAAAACAACGGCGGAGACGGCGGCGATTGAGGAACATAAGGAACTGAATTTGAATGAAGTGCCTTCAGATTCTTCTAATTAACTTG
AATGCGAGACGAAGAGCTGTCTCGTAGTTGTTTTGATCGTTCATCTTTGTTTAATTATGCTAATCCACTGTAAATCTGAATCCTAAAATCATATATTAAATTAATAAATT
AAATGTGTTAGTTTTCACTTCTTAATTATCATCTTATCTCATTCATGCTTTTCTTAATTTAAAGCGTCTAGGTTTGACTCTCATGTTTTGTTAAACTTCAGAAAAAAAGA
AAAAAAAAGAAAAAAAACCCAAAATGTTTAAATAAAATAAAAGATTTAATTACGCTATAATTGTAGCTCCAACATTCACCCTGTAATGCACGTCGTTATTCTAAATAAAG
CGTCAGGTTTGTTTTGTGGAGTTGATATTTGATAACATAGTAGGTAAACTAACGGGTGTTGAAATGATCCCACGATTCGAACAATCCAAACTATCCAATTGAAAATGTAA
GGGTTGAATTAGTTTTGTTCTTGGGTTGGGTTGGATCGAATCGCGAATTGATTAAAAAACAAAATTGGTTTGATCCAACCCAACCCAAATTATATATATATAGTACTCTT
TTC
Protein sequenceShow/hide protein sequence
MEREKRKAMSPEENGGVVEETKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTTAETAAIEEHKELNLNEVPSDSSN