CuGenDBv2

Gene ID	Clc04G12140
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function (DUF1118)
Genome location	ClcChr04:25687173..25688570
RNA-Seq Expression	Clc04G12140
Synteny	Clc04G12140
Gene Ontology terms	GO:0010027 - thylakoid membrane organization (biological process) GO:0010196 - nonphotochemical quenching (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0090391 - granum assembly (biological process) GO:0009515 - granal stacked thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009500 - Protein of unknown function DUF1118

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137438.1 uncharacterized protein LOC101204037 [Cucumis sativus]

4.3e-82

91.88

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Query:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFCSSS RAASF+YSYPS TTS  K+ LH++SMA EK  PSAAKTVGSKKIN+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQVAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

XP_008451074.1 PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo]

2.3e-83

92.39

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Query:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFCSSS RAASF+YSYPS TTS  K+ LH++SMAAEK PPSA+KTVGSKKIN+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQVAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

XP_022137623.1 uncharacterized protein LOC111009021 [Momordica charantia]

4.4e-79

89.55

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Query:  MEVTSFCSSSRAASFVYSYPSKT------TSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK
        MEVTSFCSSSR  SFVYSYP KT       ST   L V SMAAEK  PSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRAASFVYSYPSKT------TSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQ AVALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

XP_023520287.1 uncharacterized protein LOC111783600 [Cucurbita pepo subsp. pepo]

2.1e-81

90.82

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Query:  MEVTSFCSSSRAASFVYSYPSKTTSTKQSLHVYSMAAEKSPPSAAKTVGS-KKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS
        MEVTSFC SSRAASFVYSYPSKT S KQSL + SMA +K PPSAAKTV S KK+NSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS
Subjt:  MEVTSFCSSSRAASFVYSYPSKTTSTKQSLHVYSMAAEKSPPSAAKTVGS-KKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLS

Query:  AAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        AAEKAGLSLSSIEKLG LSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPE++VWEI LQ AVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  AAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

XP_038893804.1 uncharacterized protein LOC120082623 [Benincasa hispida]

1.8e-85

93.33

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Query:  MEVTSFCSSSRAASFVYSYPSKTTSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA
        MEV+SFCSSSRAASFV+SYPSKT S K+SLH++SMAAEK PPSAAKTVGSKKINSTVFPLGEKGPR+SISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA
Subjt:  MEVTSFCSSSRAASFVYSYPSKTTSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSA

Query:  AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VW+I LQV+VALVSVVGGSAAFAASNLVSNLQRSN
Subjt:  AEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ98 Uncharacterized protein

2.1e-82

91.88

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Query:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFCSSS RAASF+YSYPS TTS  K+ LH++SMA EK  PSAAKTVGSKKIN+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQVAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

A0A1S3BQ40 uncharacterized protein LOC103492437

1.1e-83

92.39

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Query:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFCSSS RAASF+YSYPS TTS  K+ LH++SMAAEK PPSA+KTVGSKKIN+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQVAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

A0A5D3BGQ3 Uncharacterized protein

1.1e-83

92.39

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Query:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
        MEVTSFCSSS RAASF+YSYPS TTS  K+ LH++SMAAEK PPSA+KTVGSKKIN+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL
Subjt:  MEVTSFCSSS-RAASFVYSYPSKTTS-TKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLL

Query:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQVAVALVS+VGGSAAFAASNLVSNLQRSN
Subjt:  SAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

A0A6J1CAU4 uncharacterized protein LOC111009021

2.1e-79

89.55

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Query:  MEVTSFCSSSRAASFVYSYPSKT------TSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK
        MEVTSFCSSSR  SFVYSYP KT       ST   L V SMAAEK  PSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRAASFVYSYPSKT------TSTKQSLHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQ AVALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

A0A6J1K230 uncharacterized protein LOC111490350

6.2e-79

87.06

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Query:  MEVTSFCSSSRAASFVYSYPSKTTSTKQS------LHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK
        MEV S  SS+RAASF+YSYP KT S  Q+      LHV++MAAEK P SA KT+GSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRAASFVYSYPSKTTSTKQS------LHVYSMAAEKSPPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED VWEIVLQ A ALVSV+GGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G74730.1 Protein of unknown function (DUF1118)

7.9e-10

38.02

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Query:  IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATD-PGT-PGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVS
        + +  ++E+ K+LS  EK+GLLS AE  GL+LSS+EKL + SKAE+LG+LS   +  GT P  L S +L  L      V L+P+D+   +V Q  +A   
Subjt:  IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATD-PGT-PGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVS

Query:  VVGGSAAFAASNLVSNLQRSN
         + G      S ++  LQ ++
Subjt:  VVGGSAAFAASNLVSNLQRSN

AT5G08050.1 Protein of unknown function (DUF1118)

2.4e-43

63.1

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Query:  SLHVYSMAAEKSPPSAA-KTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILS
        SL V+SMA +K  PSAA +T+ SKK  +T                  P +KLLTRVEQLKLL+KAEKAGLLS AEK+G SLS+IE+LGLL+KAEE G+LS
Subjt:  SLHVYSMAAEKSPPSAA-KTVGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILS

Query:  AATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN
        AAT+P TPG L +LSLGLLLLGP   Y+VPED  WE+V+QV VAL+SV+GGSAAFAAS  VSNLQ+S+
Subjt:  AATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWEIVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

Sequences

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CDS sequence

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mRNA sequence

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ATGAGAACACGTGGAAAATCCAATATCTCAATTCTGAAAACTAATCCAACTACCTACCTTTTCCATCATTCATTTCCATGGTGCGGGCCTCAGCAATTCTGTCATTCAGA
TTCTGCCCTAACCATCGCCATTCTTCACTCTTCACACACACTCTGCTCGAGATACACGGATATGGAGGTCACTTCTTTCTGTAGCAGCAGCAGAGCAGCTTCGTTCGTCT
ACTCCTATCCATCCAAAACGACTTCAACAAAACAATCTCTTCATGTATACTCCATGGCCGCCGAGAAATCTCCCCCGTCTGCCGCTAAAACCGTCGGCTCCAAGAAGATA
AACTCCACGGTGTTCCCTCTCGGCGAAAAAGGACCGAGGAGCAGCATCTCGCTTTCGACCTCGCCGCCGATTAAGCTACTGACGAGAGTGGAGCAATTGAAGCTACTGAG
CAAGGCGGAGAAGGCCGGTCTGCTGTCTGCCGCGGAGAAAGCCGGGTTGTCTCTGTCGTCGATTGAGAAATTAGGGCTTCTGTCGAAGGCTGAGGAATTAGGGATTTTAT
CGGCGGCGACAGATCCAGGAACTCCCGGAGCGCTACTGAGCCTGAGCTTAGGGCTGTTGCTATTGGGGCCTTCGTGTGTGTATTTGGTACCGGAGGACAATGTATGGGAG
ATCGTATTGCAGGTGGCGGTGGCTCTGGTCTCCGTCGTGGGCGGCTCTGCGGCGTTTGCTGCGTCGAATTTGGTGTCGAATTTGCAGAGATCGAATTGAATTTCAGCGTT
GGAGTTTTCCAATGGCAGCCATGGGAGTTGTAGTGATCAGTATCAACTTTCCTTCTCCTTCCATGTCCTCGTTTTGTCTGCTGCCATTATTGAAATTTATCATTTTCCGG
CGAACTGAAATGGCGATATGTGAACGGAAAATTCTCTGCCCTCAATTTTATACCAATGCCGATACAAAATTATAATATTAACGCATACGTTATATAACAACGTTATATAT
TCAAACCTACTTTTATCAAATCATTACGTTATGCATTTTTGTTAATTTAATTTGTTTAAACAAATTAAATTTATTTTCGTAATAAATCTTTTCCATTTTTCAACTCAAAT
TGATTATAATAGAATGTAGAAAATAGTATTGTGTTTGAATCTGCATCTTTGATTTCCACATTCTATTACTTAGAAATAGATGATGATCGGTTTCATAATTTTTTCTTCTT
CTTTTCAATGGCTTCATTATGGGAGGTTGGACTTCCCAATAGTCTTGTTGTGATTCCCAAATAGGGTCTTATCATGTATGGTAACCCTTCACGCTGAAGCGAGAATAGTT
TAA

Protein sequence

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MRTRGKSNISILKTNPTTYLFHHSFPWCGPQQFCHSDSALTIAILHSSHTLCSRYTDMEVTSFCSSSRAASFVYSYPSKTTSTKQSLHVYSMAAEKSPPSAAKTVGSKKI
NSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDNVWE
IVLQVAVALVSVVGGSAAFAASNLVSNLQRSN

Clc04G12140 (gene) of Watermelon (cordophanus) v2 genome