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Clc04G12330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G12330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:25834324..25837018
RNA-Seq ExpressionClc04G12330
SyntenyClc04G12330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037139.1 hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0571.79Show/hide
Query:  MAIVIGAHIRTQITHIHPEPQVRSEPQFCAPLGEAHIVV
        MA+ IGA IRTQI HIHP P+VRSEPQ CAPL  A+ VV
Subjt:  MAIVIGAHIRTQITHIHPEPQVRSEPQFCAPLGEAHIVV
KGN64041.1 hypothetical protein Csa_013264 [Cucumis sativus]1.9e-0859.09Show/hide
Query:  MAMAIVIGAHIRTQITHIHPEPQVRSEPQFCAP---------LGEAHIVVSLSLSDS----NPNTP
        MAMA+VIGAHIRTQITHIHPEPQ+RS+PQFCAP           +AH +   SL  S    NPN P
Subjt:  MAMAIVIGAHIRTQITHIHPEPQVRSEPQFCAP---------LGEAHIVVSLSLSDS----NPNTP
TrEMBL top hitse value%identityAlignment
A0A0A0LVL3 Uncharacterized protein9.0e-0959.09Show/hide
Query:  MAMAIVIGAHIRTQITHIHPEPQVRSEPQFCAP---------LGEAHIVVSLSLSDS----NPNTP
        MAMA+VIGAHIRTQITHIHPEPQ+RS+PQFCAP           +AH +   SL  S    NPN P
Subjt:  MAMAIVIGAHIRTQITHIHPEPQVRSEPQFCAP---------LGEAHIVVSLSLSDS----NPNTP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCGATAGTAATCGGGGCTCACATTCGGACCCAAATCACCCATATTCATCCCGAACCTCAGGTTCGGTCCGAGCCTCAGTTCTGTGCCCCACTCGGGGAGGC
TCATATAGTCGTATCTCTCTCTCTCTCTGATTCAAACCCTAACACTCCACAATCCAGCATTATCAGAGGATCGCCTTCAAGTTTTATATCCAAGCTCATCAAATCAGTGT
ACCTATATTCACACCAAAAGTCATTACCAGCAGAACAGTGGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGCGATAGTAATCGGGGCTCACATTCGGACCCAAATCACCCATATTCATCCCGAACCTCAGGTTCGGTCCGAGCCTCAGTTCTGTGCCCCACTCGGGGAGGC
TCATATAGTCGTATCTCTCTCTCTCTCTGATTCAAACCCTAACACTCCACAATCCAGCATTATCAGAGGATCGCCTTCAAGTTTTATATCCAAGCTCATCAAATCAGTGT
ACCTATATTCACACCAAAAGTCATTACCAGCAGAACAGTGGGGTTGA
Protein sequenceShow/hide protein sequence
MAMAIVIGAHIRTQITHIHPEPQVRSEPQFCAPLGEAHIVVSLSLSDSNPNTPQSSIIRGSPSSFISKLIKSVYLYSHQKSLPAEQWG