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Clc04G12680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G12680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDisulfide bond formation protein B 2, putative
Genome locationClcChr04:26071893..26072953
RNA-Seq ExpressionClc04G12680
SyntenyClc04G12680
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036087.1 putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa]2.9e-3688.04Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P LHVS++THM VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
KAG6607449.1 hypothetical protein SDJN03_00791, partial [Cucurbita argyrosperma subsp. sororia]8.1e-3180Show/hide
Query:  AATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        A+T+FL LLV+FLG+ NLL SNAVPTSRSVSL+HGS   LHVSS+THM V+ATK+E SHGRM V LNDYPGSGANNRHTPRPQFRGCADC
Subjt:  AATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
XP_008442734.1 PREDICTED: uncharacterized protein LOC103486492 [Cucumis melo]1.3e-3689.13Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P LHVSS+THM VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
XP_011649815.1 uncharacterized protein LOC101218201 [Cucumis sativus]4.1e-3586.96Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P  HVSSNT + VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
XP_038895124.1 uncharacterized protein LOC120083435 [Benincasa hispida]1.9e-3589.13Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAATHFLRLLVIFLGL +LL SNAVPTSRSVSL+ GSHP L VSSNTHM VTAT+EEVS GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
TrEMBL top hitse value%identityAlignment
A0A0A0LQ59 Uncharacterized protein2.0e-3586.96Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P  HVSSNT + VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
A0A1S3B758 uncharacterized protein LOC1034864926.2e-3789.13Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P LHVSS+THM VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
A0A5A7T3C3 Putative Disulfide bond formation protein B 21.4e-3688.04Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P LHVS++THM VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
A0A5D3BKK4 Putative Disulfide bond formation protein B 26.2e-3789.13Show/hide
Query:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        MAAA+HFLRLLVIFLGLYNLL SNAVPTSRSVSL+HGS P LHVSS+THM VT T+EE SHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
Subjt:  MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
A0A6J1KDD0 uncharacterized protein LOC1114928358.7e-3180Show/hide
Query:  AATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
        A T+FL LLV+FLG+ NLL SNAVPTSRSVSL+HGS   LHVSS+THM V+ATK+E SHGRM V LNDYPGSGANNRHTPRPQFRGCADC
Subjt:  AATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74458.1 unknown protein6.9e-0468Show/hide
Query:  LNDYPGSGANNRHTPRPQFRGCADC
        +NDYPGSGANNRHTP      C+DC
Subjt:  LNDYPGSGANNRHTPRPQFRGCADC
AT3G47510.1 unknown protein3.3e-0645.35Show/hide
Query:  LRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGC-ADC
        + LLVIF    + +       SR  SLM     I+    +T M V    EE    RMV+ LNDYPGSGANNRH PR   RGC  DC
Subjt:  LRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGC-ADC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCCACTCATTTCCTTCGTTTACTTGTCATATTCTTGGGACTTTATAACCTTCTCTCTTCCAATGCTGTCCCAACTTCAAGAAGTGTCAGCCTTATGCATGG
ATCTCATCCAATTCTTCATGTTTCAAGCAACACCCACATGCAGGTCACTGCAACAAAGGAAGAAGTGAGCCATGGAAGAATGGTTGTGGCTCTAAATGACTATCCAGGGT
CAGGAGCCAACAATCGTCACACACCAAGGCCACAATTTAGGGGATGTGCTGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
CCTCCGCTTTGAAGCAGAGCAGCAGTTTCATCATCAATGGCAGCAGCCACTCATTTCCTTCGTTTACTTGTCATATTCTTGGGACTTTATAACCTTCTCTCTTCCAATGC
TGTCCCAACTTCAAGAAGTGTCAGCCTTATGCATGGATCTCATCCAATTCTTCATGTTTCAAGCAACACCCACATGCAGGTCACTGCAACAAAGGAAGAAGTGAGCCATG
GAAGAATGGTTGTGGCTCTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCACACACCAAGGCCACAATTTAGGGGATGTGCTGATTGTTGATTAGATTTTACATTA
CAAAATTTTAGGGATTGGTTGGGCTATATATTTATATGATATATTGGTATGAAATATCTATCTATCTATAACTATATTATATGTATTATATGGGAAGATGGAAGCAGGGT
TTGAGCTTCTTCATCACTCTATTAAGCTGTTGAAAAGCTAAGGAAAGAGGTGGGTAGAGAAATTTATAAGATTAGGTGCAAAATGAGT
Protein sequenceShow/hide protein sequence
MAAATHFLRLLVIFLGLYNLLSSNAVPTSRSVSLMHGSHPILHVSSNTHMQVTATKEEVSHGRMVVALNDYPGSGANNRHTPRPQFRGCADC