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Clc04G12850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G12850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:26179824..26180291
RNA-Seq ExpressionClc04G12850
SyntenyClc04G12850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584453.1 hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1169.84Show/hide
Query:  QPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYF------SLYPLNYMKLSTPLPIEIF
        QPSFCGV+ KE+TNGIHHSSEMVAEFNAANPTCSTLYF       LY L Y+ L+T L I++F
Subjt:  QPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYF------SLYPLNYMKLSTPLPIEIF
KGN63987.1 hypothetical protein Csa_014108 [Cucumis sativus]1.1e-2287.1Show/hide
Query:  MPAICFDHITFQVYEACLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
        MPAICFDHI FQ    CLLDFQPSFCGVKGKE+TNGIHHSS+MVAEFNAANPTCS+LYFSLY
Subjt:  MPAICFDHITFQVYEACLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
TrEMBL top hitse value%identityAlignment
A0A0A0LTA5 Uncharacterized protein5.5e-2387.1Show/hide
Query:  MPAICFDHITFQVYEACLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
        MPAICFDHI FQ    CLLDFQPSFCGVKGKE+TNGIHHSS+MVAEFNAANPTCS+LYFSLY
Subjt:  MPAICFDHITFQVYEACLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCATATGCTTTGATCACATAACTTTTCAGGTATATGAAGCTTGTTTATTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAGGACCAATGGGAT
CCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCACCTTATATTTTTCTCTGTACCCGCTTAATTACATGAAATTATCCACTCCACTAC
CCATTGAAATTTTCTCACCCTCCAAATACAAGTACAGGATTGTTTTTTTCTTGAATTTTGATGTTACAAGTCACGAGGGTCTTGTCCCTAAACCCTATACTTGTCACTTA
AACAGGATCTCAATTGTTTTTTCAACTGGGATTCTTCATTTGTTCAAGAATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCCATATGCTTTGATCACATAACTTTTCAGGTATATGAAGCTTGTTTATTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAGGACCAATGGGAT
CCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCACCTTATATTTTTCTCTGTACCCGCTTAATTACATGAAATTATCCACTCCACTAC
CCATTGAAATTTTCTCACCCTCCAAATACAAGTACAGGATTGTTTTTTTCTTGAATTTTGATGTTACAAGTCACGAGGGTCTTGTCCCTAAACCCTATACTTGTCACTTA
AACAGGATCTCAATTGTTTTTTCAACTGGGATTCTTCATTTGTTCAAGAATTTGTGA
Protein sequenceShow/hide protein sequence
MPAICFDHITFQVYEACLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLYPLNYMKLSTPLPIEIFSPSKYKYRIVFFLNFDVTSHEGLVPKPYTCHL
NRISIVFSTGILHLFKNL