; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G12890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G12890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTCP domain-containing protein
Genome locationClcChr04:26198321..26200658
RNA-Seq ExpressionClc04G12890
SyntenyClc04G12890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584451.1 HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]8.7e-10077.45Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        G+DQ+ YH  HR  TSFPLQLLEKKEYD  PQPP +  SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLIPTTIPANFWMLSDANNQLLG
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVM FNS+ +    MT  KEDH       Y+ QSTTGL+PTTIPANFWM SD N+QLL 
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLIPTTIPANFWMLSDANNQLLG

Query:  GGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQD
        GGGDSLWR+  A NQD ALYR GQ SG  ++R S NLAAPLTLLPGKP  LGP+  G  G+MN DGH+NIYA Q+
Subjt:  GGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQD

KAG7020042.1 Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-10477Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        G+DQ+ YH  HR  TSFPLQLLEKKEYD  PQPP +  SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLIPTTIPANFWMLSDANNQLLG
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVM FNS+ +    MT  KEDH       Y+ QSTTGL+PTTIPANFWM SD N+QLL 
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLIPTTIPANFWMLSDANNQLLG

Query:  GGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS
        GGGDSLWR+  A NQD ALYR GQ SG  ++R S NLAAPLTLLPGKP  LGP+  G  G+MN DGH+NIYA Q   HGAAPD  VS
Subjt:  GGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS

XP_004137578.1 transcription factor TCP15 [Cucumis sativus]6.8e-12180.73Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++ PTTIPANFWMLSD NNQLL
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL

Query:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL---AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV
          G D LWR+QSA NQD +L+R GQPS    LRLSNN+    APLTLLPGKPLSLGPTAG   RG +N+D         GHLNIYA Q+PPHGAAPDTGV
Subjt:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL---AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV

Query:  S
        S
Subjt:  S

XP_008440976.1 PREDICTED: transcription factor TCP15-like [Cucumis melo]1.2e-12081.27Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++ PT IPANFWMLSD NNQLL
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL

Query:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL--AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS
          G D LWR+QSA NQD +L+R GQ S    LRLSNN+   APLTLLPGKPLSLGPTAG   RG +N        DDGHLNIYAAQ+PPHGAAPDTGVS
Subjt:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL--AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS

XP_038895370.1 transcription factor TCP15-like [Benincasa hispida]6.8e-13790.81Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRSTTSFPLQLLEKKEYD NPQPPL+IISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDHHYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDS
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMG NSEA+ N   MTQPK+DHHYL QSTTGLIP T PANFWMLSD NNQLLG GGD 
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDHHYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDS

Query:  LWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGP-TAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS
        LWR+QSANNQD AL+R GQPSGG  LR S NLAAPLTLLPGKPLSLGP TAGGGRGTMNDDGHLNIYAAQ+PPHGAAPDTGVS
Subjt:  LWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGP-TAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS

TrEMBL top hitse value%identityAlignment
A0A061FY58 TCP domain-like protein I2.9e-6146.72Show/hide
Query:  YHQNHRSTTSFPLQLLEKKEYDNNP-----QPPLDII------------------------SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLT
        +H +H    +FP QLLEKKE DN P      PP   +                        SKKP PKRTSTKDRHTKVDGRGRR RMPALCAARVFQLT
Subjt:  YHQNHRSTTSFPLQLLEKKEYDNNP-----QPPLDII------------------------SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLT

Query:  RELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYH-------------------PGVMGFNSEAITNNMTQP
        RELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF SLN SLR S +S+S+PSQLRSS +                     P  + F S +  N+M Q 
Subjt:  RELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYH-------------------PGVMGFNSEAITNNMTQP

Query:  KED----------------------------------HHYLHQSTTGLIPTT---IPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGG
        K++                                    YL QS+TG IP +   IPANFWM++++NNQ++   GD +W   S NN  +ALYR G  S G
Subjt:  KED----------------------------------HHYLHQSTTGLIPTT---IPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGG

Query:  NNLRLSNNLAAPLTLLPGKPL-SLGPTAGGGRGTMN--DDGHLNIYAAQDP
         +     N  AP+ LLPG+ L S G T+GGG G  +   +GHLN+ A  +P
Subjt:  NNLRLSNNLAAPLTLLPGKPL-SLGPTAGGGRGTMN--DDGHLNIYAAQDP

A0A0A0LSM3 TCP domain-containing protein3.3e-12180.73Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++ PTTIPANFWMLSD NNQLL
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL

Query:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL---AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV
          G D LWR+QSA NQD +L+R GQPS    LRLSNN+    APLTLLPGKPLSLGPTAG   RG +N+D         GHLNIYA Q+PPHGAAPDTGV
Subjt:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL---AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV

Query:  S
        S
Subjt:  S

A0A1S3B2E2 transcription factor TCP15-like5.6e-12181.27Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++ PT IPANFWMLSD NNQLL
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI-PTTIPANFWMLSDANNQLL

Query:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL--AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS
          G D LWR+QSA NQD +L+R GQ S    LRLSNN+   APLTLLPGKPLSLGPTAG   RG +N        DDGHLNIYAAQ+PPHGAAPDTGVS
Subjt:  GGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL--AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS

A0A5D3BGG0 Transcription factor TCP15-like2.1e-6795.07Show/hide
Query:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPG
        IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPG
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPG

A0A6J1C776 transcription factor TCP15-like3.8e-9367Show/hide
Query:  MEAGN-DQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDII---SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLL
        ME G+ +QL Y QNH  +T+FPLQLLEKKEYD++ Q   +++   SKKPS KRT+TKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLL
Subjt:  MEAGN-DQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDII---SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLL

Query:  QQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDH-----------HYLHQSTTGLIPTTIPAN
        QQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGV+ FNS+   N   MTQ KEDH            YL Q + G     IPAN
Subjt:  QQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDH-----------HYLHQSTTGLIPTTIPAN

Query:  FWMLSDANNQLLGGGGDSLWR---VQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDT
        FWMLSD N+       +SLWR   + S NNQD      G  SG   LRL+N    PLTLLPGKPL+LGPT G   GT+ +  HLNIYAAQ+PP GA PDT
Subjt:  FWMLSDANNQLLGGGGDSLWR---VQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDT

Query:  GVS
        GVS
Subjt:  GVS

SwissProt top hitse value%identityAlignment
Q53PH2 Transcription factor PCF33.6e-3276.09Show/hide
Query:  TKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYH
        TKDRHTKV+GRGRR RMPALCAARVFQLTRELGHK+DGETIEWLLQQAEPA++AATGTGTIPANF+SL  SLR +A+  S P   R++ ++H
Subjt:  TKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYH

Q93Z00 Transcription factor TCP146.8e-3965.69Show/hide
Query:  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        HQ+ + + S P    +K       KE     +    + +KKP  KR STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEP+V
Subjt:  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS
        IAATGTGTIPANF SLN SLR S +S+SLPS  RS++
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS

Q9C518 Transcription factor TCP88.6e-3482.35Show/hide
Query:  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP
        + STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPA++AATGTGTIPANF++L+ SLR S +++S P
Subjt:  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP

Q9C9L2 Transcription factor TCP159.4e-4944.63Show/hide
Query:  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        +H    +FPLQLL+     ++    L IIS         KKP PKRTSTKDRHTKV+GRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-----------------YLHQSTTGLIPTT---I
        IAATGTGTIPANF SLN SLR S +S+S  + LR   SS Y+H             +  +PK + H                 YL QST G +PT+    
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-----------------YLHQSTTGLIPTT---I

Query:  PANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY------RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH
         A FW   D N Q       +LW      +    +         G   GG+ + L  N AAP+ L  G+PL+ G   GGG G   +  H  + AA +  +
Subjt:  PANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY------RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH

Query:  GAAPDTG
            +TG
Subjt:  GAAPDTG

Q9LQF0 Transcription factor TCP234.3e-3354.11Show/hide
Query:  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP
        P      ++   +P +  +KDRH KVDGRGRR RMPA+CAARVFQLTREL HKSDGETIEWLLQQAEPA+IAATGTGTIPAN ++LN SLR S +++S P
Subjt:  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP

Query:  SQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTT
             S  +H G    N+ A+     Q    HH    S++  +P T
Subjt:  SQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTT

Arabidopsis top hitse value%identityAlignment
AT1G35560.1 TCP family transcription factor3.0e-3454.11Show/hide
Query:  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP
        P      ++   +P +  +KDRH KVDGRGRR RMPA+CAARVFQLTREL HKSDGETIEWLLQQAEPA+IAATGTGTIPAN ++LN SLR S +++S P
Subjt:  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP

Query:  SQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTT
             S  +H G    N+ A+     Q    HH    S++  +P T
Subjt:  SQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTT

AT1G58100.1 TCP family transcription factor6.1e-3582.35Show/hide
Query:  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP
        + STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPA++AATGTGTIPANF++L+ SLR S +++S P
Subjt:  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP

AT1G69690.1 TCP family transcription factor6.7e-5044.63Show/hide
Query:  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        +H    +FPLQLL+     ++    L IIS         KKP PKRTSTKDRHTKV+GRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Subjt:  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-----------------YLHQSTTGLIPTT---I
        IAATGTGTIPANF SLN SLR S +S+S  + LR   SS Y+H             +  +PK + H                 YL QST G +PT+    
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-----------------YLHQSTTGLIPTT---I

Query:  PANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY------RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH
         A FW   D N Q       +LW      +    +         G   GG+ + L  N AAP+ L  G+PL+ G   GGG G   +  H  + AA +  +
Subjt:  PANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY------RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH

Query:  GAAPDTG
            +TG
Subjt:  GAAPDTG

AT1G72010.1 TCP family transcription factor4.4e-3374.74Show/hide
Query:  SPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS
        S  +  TKDRHTKVDGRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IA+TGTGTIPANF++LN SLR    S       +SSS
Subjt:  SPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 144.8e-4065.69Show/hide
Query:  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV
        HQ+ + + S P    +K       KE     +    + +KKP  KR STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEP+V
Subjt:  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV

Query:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS
        IAATGTGTIPANF SLN SLR S +S+SLPS  RS++
Subjt:  IAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTTAGAGAAGAAGGAATATGATAATAATCCCCAACCTCC
CCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCCGCGGTCGTCGCACCCGAATGCCTGCTCTTTGTGCTG
CTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAGGCGGAGCCTGCCGTTATCGCCGCCACCGGGACCGGT
ACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCAACTAAGATCCTCATCTTACTACCACCCCGGAGTGAT
GGGGTTCAACTCTGAAGCAATAACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCACCACGGGCCTAATCCCCACTACGATTCCGGCCAACT
TTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCCAACAACCAAGACGCCGCTTTATATAGATTAGGACAA
CCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACTCTCTTTGGGACCCACTGCCGGAGGTGGACGTGGAAC
CATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGCGGCTCCCGACACCGGCGTCTCCTAA
mRNA sequenceShow/hide mRNA sequence
TATATATTACTCCCCATTCCAAAACCAAACATCTAAAACCCCTTTCAAAGTTGAAGCCATTTATTTATTTTCTCTTCAATTCCTGACGATCTACATTATTGAGACCCACC
AGAGATCCAAATTAAGAGATCATAATTTGAAGAGTGATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTT
AGAGAAGAAGGAATATGATAATAATCCCCAACCTCCCCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCC
GCGGTCGTCGCACCCGAATGCCTGCTCTTTGTGCTGCTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAG
GCGGAGCCTGCCGTTATCGCCGCCACCGGGACCGGTACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCA
ACTAAGATCCTCATCTTACTACCACCCCGGAGTGATGGGGTTCAACTCTGAAGCAATAACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCA
CCACGGGCCTAATCCCCACTACGATTCCGGCCAACTTTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCC
AACAACCAAGACGCCGCTTTATATAGATTAGGACAACCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACT
CTCTTTGGGACCCACTGCCGGAGGTGGACGTGGAACCATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGCGGCTCCCGACACCGGCG
TCTCCTAATGATAATTGTTGCCTATGCCTTTCCGTACTAATTTCTTCATATATTATGTATATGGTTTGAGACGTGAGGTTAGACATATGATTCTCTTCTCATAACAATCC
TTCTTATTACCTATTCATTTTCAGTTTATTATTGTTTCTTTTTCTCTTTTTAATATTTCTCAATATACCC
Protein sequenceShow/hide protein sequence
MEAGNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTG
TIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQ
PSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS