; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G13210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G13210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor MYB52-like
Genome locationClcChr04:26438453..26439712
RNA-Seq ExpressionClc04G13210
SyntenyClc04G13210
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455801.1 PREDICTED: transcriptional activator Myb-like [Cucumis melo]1.7e-9076.47Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  +++N+NHRLLLSSFLQLH YPT T +SF+PKPP +      A H+S   IHYYDFL VN T+S NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDYEEVNN   +  +    +LPFIDFFSAS  ++ SIS
Subjt:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

XP_011649446.1 transcription factor MYB52 [Cucumis sativus]3.9e-9077.73Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  ++NN+N+RLLLSSFLQLH YPT + +SFIPKPP +      A H+S   IHYYDFL VN T+S+NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDYEEVNN        V  +LPFIDFFSAS ++N SIS
Subjt:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

XP_023001003.1 transcription factor MYB52-like [Cucurbita maxima]1.7e-8269.6Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---------RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESIN
        MAR+SR +         ++K +T+TQT +PSS  H      LLLSSFLQ    P            P P+ SFIPKP D     S+ +YDFLH+N ESIN
Subjt:  MARRSRSN---------RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESIN

Query:  GSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
         SEVIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  GSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

XP_023520216.1 transcription factor MYB52-like [Cucurbita pepo subsp. pepo]5.6e-8169.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESINGSEVI
        MAR+SR +   ++K   +T+T TPSS +H      LL SSFLQ    P             P P+ SFIPKP D     S+ +YDFLH+N ESIN SEVI
Subjt:  MARRSRSN---RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESINGSEVI

Query:  DNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
        DNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  DNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

XP_038895550.1 transcription factor MYB54-like [Benincasa hispida]3.7e-9380.5Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNN------HNH-RLLLSSFLQLHPYPTPTPVSFIPKPPD---NATHNSIHYYDFLHVNTESINGSEVIDNSRKE
        MARRSR N+SK  TQTQTP+ S  HHNN      HNH RLLLSSFLQLH  PT   + FIPKPP      T+ S+HYYDFL+VNTESINGSEVIDNSRK 
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNN------HNH-RLLLSSFLQLHPYPTPTPVSFIPKPPD---NATHNSIHYYDFLHVNTESINGSEVIDNSRKE

Query:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTS--NNSISS
        EDYEEVNN E  +      VLPFIDFFSASQTS  N+SISS
Subjt:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTS--NNSISS

TrEMBL top hitse value%identityAlignment
A0A0A0LPV0 Uncharacterized protein1.9e-9077.73Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  ++NN+N+RLLLSSFLQLH YPT + +SFIPKPP +      A H+S   IHYYDFL VN T+S+NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDYEEVNN        V  +LPFIDFFSAS ++N SIS
Subjt:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

A0A1S3C1Q2 transcriptional activator Myb-like8.4e-9176.47Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  +++N+NHRLLLSSFLQLH YPT T +SF+PKPP +      A H+S   IHYYDFL VN T+S NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDYEEVNN   +  +    +LPFIDFFSAS  ++ SIS
Subjt:  EDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

A0A6J1CAM4 transcription factor MYB52-like6.5e-6763.88Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVER+G HNWNAIAQK++GRSGKSCRLRWFNQLDPRINRTPFT++EE RL+ASHR+HGNRWAIIAR FPGRTDNA+KNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKP-PDNAT-HNSIHYYDFLHVNTESING--SEVIDNSRKEEDYEEV
        MAR  R ++S                  ++HRL   +F  ++ Y +P P S IP P PD +  H  + +YDFLH+N + I    SEVIDNSRK++  EEV
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKP-PDNAT-HNSIHYYDFLHVNTESING--SEVIDNSRKEEDYEEV

Query:  NNQEAATVDDVGPVLPFIDFFSASQTS
        N Q  A  DD  P LPFIDFFSA QTS
Subjt:  NNQEAATVDDVGPVLPFIDFFSASQTS

A0A6J1EDT2 transcription factor MYB52-like3.5e-8169.23Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN-----RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESINGSE
        MAR+SR +     ++K  T+T+T TPSS +H      LL SSFLQ    P             P P+ SFIPKP D     S+ +YDFLH+N ESIN SE
Subjt:  MARRSRSN-----RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESINGSE

Query:  VIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
        VIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  VIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

A0A6J1KP91 transcription factor MYB52-like8.4e-8369.6Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---------RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESIN
        MAR+SR +         ++K +T+TQT +PSS  H      LLLSSFLQ    P            P P+ SFIPKP D     S+ +YDFLH+N ESIN
Subjt:  MARRSRSN---------RSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPV-SFIPKPPDNATHNSIHYYDFLHVNTESIN

Query:  GSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
         SEVIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  GSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

SwissProt top hitse value%identityAlignment
Q5NBM8 Transcription factor CSA6.3e-5161.69Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRS-----NRSKTLTQTQTPTPS-----------SLHHNNHNHRLLLSSF
        MARR R       R K  + + +P P+           +LHH++H +    S +
Subjt:  MARRSRS-----NRSKTLTQTQTPTPS-----------SLHHNNHNHRLLLSSF

Q6R0C4 Transcription factor MYB522.8e-5950.58Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSR----------------------------SNRSKTLTQTQTPTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDF
        MARR R                                +  T T    P    H NH   L   L+  +      TP     I +   + T   + +Y+F
Subjt:  MARRSR----------------------------SNRSKTLTQTQTPTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDF

Query:  LHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI
        L VNT+S    E+IDNSRK+E+ +   N      + V    PF DF S   +++  +
Subjt:  LHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI

Q9FX36 Transcription factor MYB541.8e-5849.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PVSFIPKPPDNATHNSIH------------------------YYDFL
        MARR+R      L  + T + S +     + ++++SS    H Y +       P  FI  P   +  N +H                        +Y+FL
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PVSFIPKPPDNATHNSIH------------------------YYDFL

Query:  HVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSN
         VNT+S N SE+ID    +    + + +  + V       PF DF S   +++
Subjt:  HVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSN

Q9LQX5 Transcription factor MYB1177.6e-4958.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH

Q9SEZ4 Transcription factor MYB1053.8e-4880.56Show/hide
Query:  SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
        SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMA
Subjt:  SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA

Query:  RRSRSNRS
        R+ R   S
Subjt:  RRSRSNRS

Arabidopsis top hitse value%identityAlignment
AT1G17950.1 myb domain protein 522.0e-6050.58Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSR----------------------------SNRSKTLTQTQTPTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDF
        MARR R                                +  T T    P    H NH   L   L+  +      TP     I +   + T   + +Y+F
Subjt:  MARRSR----------------------------SNRSKTLTQTQTPTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDF

Query:  LHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI
        L VNT+S    E+IDNSRK+E+ +   N      + V    PF DF S   +++  +
Subjt:  LHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI

AT1G26780.1 myb domain protein 1175.4e-5058.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH

AT1G26780.2 myb domain protein 1175.4e-5058.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFI--------PKPPDNATHNSIH

AT1G73410.1 myb domain protein 541.3e-5949.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PVSFIPKPPDNATHNSIH------------------------YYDFL
        MARR+R      L  + T + S +     + ++++SS    H Y +       P  FI  P   +  N +H                        +Y+FL
Subjt:  MARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PVSFIPKPPDNATHNSIH------------------------YYDFL

Query:  HVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSN
         VNT+S N SE+ID    +    + + +  + V       PF DF S   +++
Subjt:  HVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSN

AT4G33450.1 myb domain protein 697.1e-5048.13Show/hide
Query:  CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIM
        C RGHWRP ED+ LR+LVE+YGP NWN IAQ L GRSGKSCRLRW+NQLDP I + PFTEEEEERL+ +HR+ GNRWA IARLFPGRTDNAVKNH+HVIM
Subjt:  CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIM

Query:  ARRSRSNRSKTLTQTQTPT-------PSSLHHNNHNH----RLLLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDFLH-VNTESINGSEVIDNSR-
        ARR R N S T T T   T        SSL   N +H    R        L PY      SF+  PP N    S    +  H +  E     E++D    
Subjt:  ARRSRSNRSKTLTQTQTPT-------PSSLHHNNHNH----RLLLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDFLH-VNTESINGSEVIDNSR-

Query:  ----KEEDYEEVNNQEAATVDDVGPV--LPFIDFFSASQTS
               D++  +N++  ++ D G    + FIDF      S
Subjt:  ----KEEDYEEVNNQEAATVDDVGPV--LPFIDFFSASQTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAAGGAAG
ATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACACAGGGTTC
ATGGCAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGATCAAATAGATCC
AAAACCCTAACCCAAACCCAAACCCCAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATCCATATCCCACTCC
TACTCCTGTCTCATTCATCCCCAAACCACCTGATAATGCAACCCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACGGAGTCCATCAATGGGAGTGAAGTGA
TAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATAATCAAGAAGCCGCCACCGTTGACGATGTCGGGCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCC
CAGACCTCCAACAACTCCATCTCATCCTAA
mRNA sequenceShow/hide mRNA sequence
TATATATATATATATATATATATATATTTGCGGAGTTGGTTTTTATATTATTTGTAAAATTAAAATAAGATTAGGGTTTAGGGATAATGTGCAGCAGAGGGCACTGGCGG
CCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCCGGGAAGAGCTGCCGGTTGAG
ATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACACAGGGTTCATGGCAATAGATGGGCCATCATCG
CAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACC
CCAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATCCATATCCCACTCCTACTCCTGTCTCATTCATCCCCAA
ACCACCTGATAATGCAACCCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACGGAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGG
ATTATGAAGAGGTCAATAATCAAGAAGCCGCCACCGTTGACGATGTCGGGCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCA
TCCTAACATATATATGCATATATTATTAACCCTAAAAACCTCCTTTATCTCACATTTCATCTAACCCATTTGGGGAATCATGAAATTCATCACCCCGGCCATATACATAA
TTTACATATATACATTTATGTATCCATAAGTATAGTATAATTGTCATTTGTACACACAATTTCAAACTTACATCACTTTTGTTATTTCTATTGTTTCTAAACGTTCTTTT
GTCGTCCCATGTTTTTCTTCTCTTCCTTCCAACACTACTGTACTAAACCCTCAGGTTCCCAACTTAATTCGTCGCTATCATTTTACATTTCCTACTTAACTTCTCTGTCC
ATAATTGTTGAAATTGGATAACATATTTATATATATAGAAATCG
Protein sequenceShow/hide protein sequence
MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRSNRS
KTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSAS
QTSNNSISS