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Clc05G00140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G00140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBeta-galactosidase
Genome locationClcChr05:107977..111123
RNA-Seq ExpressionClc05G00140
SyntenyClc05G00140
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049856.1 Beta-galactosidase [Cucumis melo var. makuwa]1.2e-0752.05Show/hide
Query:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS
        QY KLE V+RVYDFLAG+N KF+ V    +G      L  VC EVRLEE RT+AM+ + +   DS+AFS + S
Subjt:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS

KAA0061964.1 reverse transcriptase [Cucumis melo var. makuwa]4.0e-0850.68Show/hide
Query:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK
        G QY KLE V+RVYDFL G+N KF+ V    +G      L  VC EVRLEE RT+AM+ + +   DS+AFS +
Subjt:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK

XP_038887073.1 ABC transporter C family member 2-like [Benincasa hispida]1.9e-1054.67Show/hide
Query:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS
        GVQY K+E V+R+YDFL G+NSKF+ V   N+G  +   L  VC EVRLEE RTSAMN    +  DS+AF  K S
Subjt:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS

XP_038889967.1 uncharacterized protein LOC120079712 [Benincasa hispida]4.7e-0955.56Show/hide
Query:  VQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK
        VQY KLE ++RVYDFLAG+N+KFNAV    +G      L  VCLEVRLEE R+SA N    +  DS+AF  K
Subjt:  VQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK

XP_038904284.1 stress response protein NST1-like [Benincasa hispida]8.0e-0953.42Show/hide
Query:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK
        GVQY K+E  +RVYDF+AG+NSKF+ V    +G      L  VC EVRLEE RTSAMN   ++  DS+AF  K
Subjt:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK

TrEMBL top hitse value%identityAlignment
A0A5A7TPJ1 UBN2_3 domain-containing protein9.5e-0852.05Show/hide
Query:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS
        QY KLE V+RVYDFLAG+N KF+ V    +G      L  VC EVRLEE  T+AM  + +S  DS+AFS + S
Subjt:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS

A0A5A7U3G7 Reverse transcriptase9.5e-0850.72Show/hide
Query:  VQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAF
        +QY KLE V R+YDFLAG+N KFN +     G  +   L  VC EVRLEE RT+AM  + + + DS+AF
Subjt:  VQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAF

A0A5A7U6Q8 Beta-galactosidase5.6e-0852.05Show/hide
Query:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS
        QY KLE V+RVYDFLAG+N KF+ V    +G      L  VC EVRLEE RT+AM+ + +   DS+AFS + S
Subjt:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS

A0A5A7V3T3 Reverse transcriptase1.9e-0850.68Show/hide
Query:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK
        G QY KLE V+RVYDFL G+N KF+ V    +G      L  VC EVRLEE RT+AM+ + +   DS+AFS +
Subjt:  GVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCK

A0A5D3CBR3 Beta-galactosidase5.6e-0852.05Show/hide
Query:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS
        QY KLE V+RVYDFLAG+N KF+ V    +G      L  VC EVRLEE RT+AM+ + +   DS+AFS + S
Subjt:  QYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATCATAAGACCTTGGCTTCCTTGGCGTATTCCCGTTCCAGCTTCCAGACTGCTTGTATTTTTGTAAGTTTGTTGCAACTGCATTCCAGAAAGCTTAGCAAGCC
GTGTCAAGACTTAAGACCAGACCAATTCGATAGTCGATTCATCCGTATTGGATTGGAGGGAGAGATTTGGAATTTGCCGAGACTGAGGGATCCTGGGCCATCGTCACCTA
CTGCTTCTTCTATCAATCCCTTCGACCTCCTCATCGATGACGAAGATGACTCCCAAATTAACCCTCAACAGGAAACCCTAGAAACCCTAGCCGTCGTCGACGAAAATAAC
CCTAGAACAGATCCGCCGCCTCACTTGCCGCTACCGCCGTCACCGATGGAGTCCACCCCCGCCACCACCGAGTCAGCTGTTCCAAGCCGCACGTCCAGCAGTACCTCTGG
TCGCTCAATCTCGACGTCGCCGCCGCCCCGCCATTACAAACCCCTAGCGGCGCAACCCCTCAGACTCAACGCCGCCGCCGGGGAACGCTGGAGCTGCGACTCGGACCGAC
CAGCAAGCCGCCGCCCATCCCACGTTGAACCCAGATCTGAGATTTCCGCCAATTATCGCCGCCCGGTTCTTCTTCGATCGTCGAGGGAAACTCTTCGTCTGGGTTTTGCG
AGCAGCAGAGCAGAGGAGTCCCAAAGCCGCCGTGTTTCCGACCACCGTGGTGCCTTTTCCGTCGACTCTTCCTCCGACCACCGTGGGCTACCACCAGATCTGGTGGTTTT
TACTCAGATCCGACCAGATCTGTGGTTTTTACCTCAGATCCGGACCAGATCATGGGGGGTTTGCCTCAACAAAATCACTTCACAACAACTCGTGGACCTTCAAGCAAATT
TTCAGCAACAAATCGCCGCTCTTGGGGCTGCCTTGAGCTCTTCTAATCTTGGTCAAAGTACAGTCAATCTCAGGTGTTTTCTCAGATTTACCGATGTATCCAGAGAATCT
GAAAATGGATTTGTGTCAGAGAACTTGTCTGGATTGTCCTTCGGGGGAGTTCAGTACTACAAACTTGAGGCAGTCGAACGAGTATATGATTTCTTAGCCGGTATAAATTC
CAAATTCAATGCTGTGGCGAAGTCGAATATTGGGACAGAAACCAACATCGACCTTGATGGAGTCTGTTTAGAGGTTCGGCTGGAGGAAAGTAGAACGAGCGCTATGAATA
CTGTGGGTAGTTCCATTACTGACTCATCTGCGTTCAGTTGCAAAATCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCATCATAAGACCTTGGCTTCCTTGGCGTATTCCCGTTCCAGCTTCCAGACTGCTTGTATTTTTGTAAGTTTGTTGCAACTGCATTCCAGAAAGCTTAGCAAGCC
GTGTCAAGACTTAAGACCAGACCAATTCGATAGTCGATTCATCCGTATTGGATTGGAGGGAGAGATTTGGAATTTGCCGAGACTGAGGGATCCTGGGCCATCGTCACCTA
CTGCTTCTTCTATCAATCCCTTCGACCTCCTCATCGATGACGAAGATGACTCCCAAATTAACCCTCAACAGGAAACCCTAGAAACCCTAGCCGTCGTCGACGAAAATAAC
CCTAGAACAGATCCGCCGCCTCACTTGCCGCTACCGCCGTCACCGATGGAGTCCACCCCCGCCACCACCGAGTCAGCTGTTCCAAGCCGCACGTCCAGCAGTACCTCTGG
TCGCTCAATCTCGACGTCGCCGCCGCCCCGCCATTACAAACCCCTAGCGGCGCAACCCCTCAGACTCAACGCCGCCGCCGGGGAACGCTGGAGCTGCGACTCGGACCGAC
CAGCAAGCCGCCGCCCATCCCACGTTGAACCCAGATCTGAGATTTCCGCCAATTATCGCCGCCCGGTTCTTCTTCGATCGTCGAGGGAAACTCTTCGTCTGGGTTTTGCG
AGCAGCAGAGCAGAGGAGTCCCAAAGCCGCCGTGTTTCCGACCACCGTGGTGCCTTTTCCGTCGACTCTTCCTCCGACCACCGTGGGCTACCACCAGATCTGGTGGTTTT
TACTCAGATCCGACCAGATCTGTGGTTTTTACCTCAGATCCGGACCAGATCATGGGGGGTTTGCCTCAACAAAATCACTTCACAACAACTCGTGGACCTTCAAGCAAATT
TTCAGCAACAAATCGCCGCTCTTGGGGCTGCCTTGAGCTCTTCTAATCTTGGTCAAAGTACAGTCAATCTCAGGTGTTTTCTCAGATTTACCGATGTATCCAGAGAATCT
GAAAATGGATTTGTGTCAGAGAACTTGTCTGGATTGTCCTTCGGGGGAGTTCAGTACTACAAACTTGAGGCAGTCGAACGAGTATATGATTTCTTAGCCGGTATAAATTC
CAAATTCAATGCTGTGGCGAAGTCGAATATTGGGACAGAAACCAACATCGACCTTGATGGAGTCTGTTTAGAGGTTCGGCTGGAGGAAAGTAGAACGAGCGCTATGAATA
CTGTGGGTAGTTCCATTACTGACTCATCTGCGTTCAGTTGCAAAATCAGCTAG
Protein sequenceShow/hide protein sequence
MTHHKTLASLAYSRSSFQTACIFVSLLQLHSRKLSKPCQDLRPDQFDSRFIRIGLEGEIWNLPRLRDPGPSSPTASSINPFDLLIDDEDDSQINPQQETLETLAVVDENN
PRTDPPPHLPLPPSPMESTPATTESAVPSRTSSSTSGRSISTSPPPRHYKPLAAQPLRLNAAAGERWSCDSDRPASRRPSHVEPRSEISANYRRPVLLRSSRETLRLGFA
SSRAEESQSRRVSDHRGAFSVDSSSDHRGLPPDLVVFTQIRPDLWFLPQIRTRSWGVCLNKITSQQLVDLQANFQQQIAALGAALSSSNLGQSTVNLRCFLRFTDVSRES
ENGFVSENLSGLSFGGVQYYKLEAVERVYDFLAGINSKFNAVAKSNIGTETNIDLDGVCLEVRLEESRTSAMNTVGSSITDSSAFSCKIS