; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G00170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G00170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionethylene-responsive transcription factor 13-like
Genome locationClcChr05:129943..130851
RNA-Seq ExpressionClc05G00170
SyntenyClc05G00170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134276.1 ethylene-responsive transcription factor 13 [Cucumis sativus]2.6e-4571.15Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA
        MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA

Query:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA
        AFKIRGAKAKLNFPHLIDSDS  STS STS         S   PPSPTHA H+TSA
Subjt:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA

XP_008439349.1 PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo]3.3e-4875Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA
        MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA

Query:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH
        AFKIRGAKAKLNFPHLIDS S +STS STS         STKRPPSPTHA H
Subjt:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH

XP_010544359.1 PREDICTED: ethylene-responsive transcription factor 13-like [Tarenaya hassleriana]3.2e-2757.02Show/hide
Query:  SSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAA
        SS   S VLESIR++LLEE+ S            S+   + ++K    + V+   ++GVRRRPWGKYAAEIRDPK+NGAR WLGT++TA+DAA+AYDRAA
Subjt:  SSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAA

Query:  FKIRGAKAKLNFPHLIDSDSI
        F++RGAKAKLNFPHLI +D +
Subjt:  FKIRGAKAKLNFPHLIDSDSI

XP_022151925.1 ethylene-responsive transcription factor 14-like [Momordica charantia]8.5e-2855.06Show/hide
Query:  DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAF
        D+LE IR+HLLEE      +  + + N +   +S   +     E     V + QFKGVRRRPWGKYAAEIRDP R GARTWLGTF TA+DAALAYDRAAF
Subjt:  DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAF

Query:  KIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR
        K+RGAKAKLNFPHLIDS+   S   S + +T+       KRP  PT   H+TS S+RR
Subjt:  KIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR

XP_038907088.1 ethylene-responsive transcription factor 13-like [Benincasa hispida]7.6e-6180.72Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRE-SSAIIIQHHKK-----EAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAA
        MSSWRESDVLESIRQHLLEENNSG G G+GDGRE SSAI I HH K      AA+N VQL+QFKGVRRRPWGKYA EIRDPKRNGARTWLGTFDTAQDAA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRE-SSAIIIQHHKK-----EAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAA

Query:  LAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR
        LAYDRAAF+IRGAKAKLNFPHLIDSDSIWSTST            STKRP SPTHAQH+TSASKRR
Subjt:  LAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2V9 AP2/ERF domain-containing protein1.3e-4571.15Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA
        MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA

Query:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA
        AFKIRGAKAKLNFPHLIDSDS  STS STS         S   PPSPTHA H+TSA
Subjt:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA

A0A0A0L893 AP2/ERF domain-containing protein3.0e-2654.01Show/hide
Query:  LESIRQHLLEE--------NN----------SGSGSG-------NGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWL
        LE IR+HLLE+        NN          S SG+G       N    + S+III+ + +E ++   + LQF+GVRRRPWGKYAAEIRDP + GAR WL
Subjt:  LESIRQHLLEE--------NN----------SGSGSG-------NGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWL

Query:  GTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS
        GT+ TAQDAALAYDRAAF++RGAKAKLNFPH+I S++
Subjt:  GTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS

A0A1S3AZ89 ethylene-responsive transcription factor 13-like1.6e-4875Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA
        MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA

Query:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH
        AFKIRGAKAKLNFPHLIDS S +STS STS         STKRPPSPTHA H
Subjt:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH

A0A5A7TYW8 Ethylene-responsive transcription factor 13-like1.6e-4875Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA
        MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA     + +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRA
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRA

Query:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH
        AFKIRGAKAKLNFPHLIDS S +STS STS         STKRPPSPTHA H
Subjt:  AFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQH

A0A6J1DCJ3 ethylene-responsive transcription factor 14-like4.1e-2855.06Show/hide
Query:  DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAF
        D+LE IR+HLLEE      +  + + N +   +S   +     E     V + QFKGVRRRPWGKYAAEIRDP R GARTWLGTF TA+DAALAYDRAAF
Subjt:  DVLESIRQHLLEEN-----NSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAF

Query:  KIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR
        K+RGAKAKLNFPHLIDS+   S   S + +T+       KRP  PT   H+TS S+RR
Subjt:  KIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR

SwissProt top hitse value%identityAlignment
O80337 Ethylene-responsive transcription factor 1A1.4e-2058.89Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSASTKR
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYDRAAF++RG++A LNFP  ++S   D +   S  +S S+S    A  KR
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSASTKR

O80338 Ethylene-responsive transcription factor 23.6e-2156.99Show/hide
Query:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSAST
        V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYD AAF++RG++A LNFP  ++S   D +  TS  +S+S+S+S+S+++
Subjt:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSAST

Q8L9K1 Ethylene-responsive transcription factor 132.5e-2254.29Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRT
        +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T +DAA+AYDRAAF++RG+KAKLNFPHLI            S           +R P P+ +   T
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRT

Query:  SASKR
        S  KR
Subjt:  SASKR

Q9LTC5 Ethylene-responsive transcription factor ERF0981.0e-2060.87Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH----LIDSDSI---WSTSTSTSASTSTSTSAS
        +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TA++AA AYDRAAF +RG  A LNFP+     +D  S+   +++S+S+S+S STST+ S
Subjt:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH----LIDSDSI---WSTSTSTSASTSTSTSAS

Q9LW50 Ethylene-responsive transcription factor 22.8e-2170.49Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLI
        ++GVR+RPWGK+AAEIRDP +NGAR WLGT++TA++AALAYD+AA+++RG+KA LNFPH I
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLI

Arabidopsis top hitse value%identityAlignment
AT2G44840.1 ethylene-responsive element binding factor 131.8e-2354.29Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRT
        +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T +DAA+AYDRAAF++RG+KAKLNFPHLI            S           +R P P+ +   T
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRT

Query:  SASKR
        S  KR
Subjt:  SASKR

AT3G23230.1 Integrase-type DNA-binding superfamily protein7.5e-2260.87Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH----LIDSDSI---WSTSTSTSASTSTSTSAS
        +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TA++AA AYDRAAF +RG  A LNFP+     +D  S+   +++S+S+S+S STST+ S
Subjt:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH----LIDSDSI---WSTSTSTSASTSTSTSAS

AT4G17500.1 ethylene responsive element binding factor 19.7e-2258.89Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSASTKR
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYDRAAF++RG++A LNFP  ++S   D +   S  +S S+S    A  KR
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSASTKR

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.2e-2159.3Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSAST
        +++GVRRRPWGKYAAEIRD +++G R WLGTFDTA++AA AYD+AA+ +RG  A LNFPH  +  S  S+ST+ + S+S S SAS+
Subjt:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSAST

AT5G47220.1 ethylene responsive element binding factor 22.6e-2256.99Show/hide
Query:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSAST
        V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYD AAF++RG++A LNFP  ++S   D +  TS  +S+S+S+S+S+++
Subjt:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDS---DSIWSTSTSTSASTSTSTSAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGC
AATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAG
ATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAG
CTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCC
AACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
AGGACAGAAATGGATTGAAAAAGAAGGGGGAATTGGAATTGGCATTATGATATGATATTATTTTGTACACGCGTTTTTGTTTAAATGAAGATGGTATTTGGAGATTTTTT
TTTTTTCAAGGAGGTTGGTTCAGGGAAGCAGCGAGATTTGAGATGTACATATAAAATGAAGGAGAAGGGAGATGAGGGGGCAAAGCCACTGGAAGACTAACAGAAATTAG
ATATAATAACTATAATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGC
CGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGC
GGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAG
GAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAG
CGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGACATTAATTGAACACCCGATAGCGCCCCTACGCAACGCAACTTTGATTCAGTGT
CATTACTGTCTTGTTTTTCACATTCTCCTACTTGCTTGCTTTCTCACTCCGGATGGGTGGGGGGGGGAGGGGGGAGTGTTCCTCTAGGCCGCTGCCTGCGGAGCGACAAT
CCCATTCCGTCTCCTCTCTCACATTTTCA
Protein sequenceShow/hide protein sequence
MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAK
LNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR