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Clc05G00830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G00830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-responsive family protein
Genome locationClcChr05:590320..590634
RNA-Seq ExpressionClc05G00830
SyntenyClc05G00830
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048857.1 auxin-responsive family protein [Cucumis melo var. makuwa]3.0e-5092.59Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN----HHNHH
        MG GERRRQSGAAVPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN    HH+HH
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN----HHNHH

Query:  VGCFRVSF
        +GCFRVSF
Subjt:  VGCFRVSF

KAE8650220.1 hypothetical protein Csa_011388 [Cucumis sativus]1.8e-4787.16Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH
        MG GERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN       HH
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH

Query:  NHHVGCFRV
        +HH+GCFR+
Subjt:  NHHVGCFRV

XP_004133791.1 auxin-responsive protein SAUR32 [Cucumis sativus]9.7e-4988.29Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH
        MG GERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN       HH
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH

Query:  NHHVGCFRVSF
        +HH+GCFRVSF
Subjt:  NHHVGCFRVSF

XP_022924405.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]5.3e-4793.33Show/hide
Query:  MGSGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC
        MG GERRRQ SGA VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR  HH+HHVGC
Subjt:  MGSGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

XP_038900878.1 auxin-responsive protein SAUR32-like [Benincasa hispida]4.7e-5195.19Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGCF
        MG GERRRQS AAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+HH+HH+GCF
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGCF

Query:  RVSF
        RVSF
Subjt:  RVSF

TrEMBL top hitse value%identityAlignment
A0A0A0L5S7 Uncharacterized protein4.7e-4988.29Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH
        MG GERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN       HH
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN-------HH

Query:  NHHVGCFRVSF
        +HH+GCFRVSF
Subjt:  NHHVGCFRVSF

A0A5D3DBZ9 Auxin-responsive family protein1.5e-5092.59Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN----HHNHH
        MG GERRRQSGAAVPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN    HH+HH
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHN----HHNHH

Query:  VGCFRVSF
        +GCFRVSF
Subjt:  VGCFRVSF

A0A6J1EEX5 auxin-responsive protein SAUR32-like2.6e-4793.33Show/hide
Query:  MGSGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC
        MG GERRRQ SGA VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR  HH+HHVGC
Subjt:  MGSGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

A0A6J1ICI8 auxin-responsive protein SAUR32-like1.9e-4283.18Show/hide
Query:  MGSGER---RRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHV
        MG GER   R+ S  AVP+GCLAV+VGQ+GE+QQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVEEFRHVQ MIDRENSFHRRH H++HH+
Subjt:  MGSGER---RRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHV

Query:  GCFRVSF
        GCFRVSF
Subjt:  GCFRVSF

A0A6J1IWQ0 auxin-responsive protein SAUR32-like9.8e-4792.38Show/hide
Query:  MGSGERRR-QSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC
        M  G+RRR  SGAAVPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH HH+HHVGC
Subjt:  MGSGERRR-QSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.4e-1352.24Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI
        VP+G LA+ VGQK  +  R +VP++YFNHP F +LL+EAE+EYGF  +G I IPC   +F  V+  I
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI

P33081 Auxin-induced protein 15A5.4e-1043.04Show/hide
Query:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMID
        G R+    A  PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G + IPC  + F+ +   ++
Subjt:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMID

P33082 Auxin-induced protein X154.1e-1045.95Show/hide
Query:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV
        G R+  +    PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G + IPC  E F+ +
Subjt:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV

Q41220 Auxin-responsive protein SAUR151.7e-1140.74Show/hide
Query:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI
        +G+ +  R+  ++ P+G +AV VG+  ++++R+VVPV Y N P F QLL ++EEE+G+D   G + IPCH   F  V   I
Subjt:  MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI

Q9ZUZ3 Auxin-responsive protein SAUR321.6e-3361.67Show/hide
Query:  MGSGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH
        MG+GE+        R+QS     VPKGCLA++VG +GEEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +
Subjt:  MGSGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH

Query:  NHHNHH---------VGCFR
        NHH+ H         VGCFR
Subjt:  NHHNHH---------VGCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.1e-3461.67Show/hide
Query:  MGSGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH
        MG+GE+        R+QS     VPKGCLA++VG +GEEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +
Subjt:  MGSGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH

Query:  NHHNHH---------VGCFR
        NHH+ H         VGCFR
Subjt:  NHHNHH---------VGCFR

AT3G60690.1 SAUR-like auxin-responsive protein family1.0e-1649.37Show/hide
Query:  RQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF
        R+    VPKG  AV +G+K  + QR +VP++YFNHP F +LL+EAEEE+GF Q+G I IPC   +F+ VQ  I+  + F
Subjt:  RQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF

AT3G61900.1 SAUR-like auxin-responsive protein family2.4e-2979.17Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS
        VPKGCLA++VG K EE+QRFVVPV YFNHP FMQLL+EAEEEYGF+QKGTI IPCHVE FR+VQ MI+RE S
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS

AT4G00880.1 SAUR-like auxin-responsive protein family5.5e-3471.88Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS-------FHRRHNHHNHHVGCFRV
        VPKGCLAV+VGQ GEEQ+RFV+PVMYFNHP F QLLKEAEEE+GF QKGTI IPCHVEEFR+VQG+IDREN+           H+HHNH + CFRV
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS-------FHRRHNHHNHHVGCFRV

AT5G53590.1 SAUR-like auxin-responsive protein family4.4e-2351.55Show/hide
Query:  VPKGCLAVRVGQKGEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE--------NSFHRRHNHHNHHVGCF
        VPKGC+A+ VG + +E+   RFVVP+++ +HP F+ LLKEAE+EYGF   G I IPC V+EF+HVQ +ID E           H  HNHHN+H+ CF
Subjt:  VPKGCLAVRVGQKGEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE--------NSFHRRHNHHNHHVGCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGCGGAGAGAGACGACGGCAGTCCGGCGCCGCCGTACCGAAAGGGTGTTTGGCGGTGAGAGTGGGGCAGAAAGGGGAAGAGCAGCAGAGATTTGTGGTGCCGGT
GATGTACTTCAATCACCCGCGGTTCATGCAATTACTGAAAGAGGCAGAGGAAGAGTACGGATTTGATCAGAAGGGGACCATCGCTATTCCTTGCCACGTGGAGGAGTTTC
GGCACGTGCAGGGGATGATTGATCGTGAAAATTCATTCCACCGCCGTCACAACCACCACAACCACCACGTCGGTTGCTTTCGGGTTTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGCGGAGAGAGACGACGGCAGTCCGGCGCCGCCGTACCGAAAGGGTGTTTGGCGGTGAGAGTGGGGCAGAAAGGGGAAGAGCAGCAGAGATTTGTGGTGCCGGT
GATGTACTTCAATCACCCGCGGTTCATGCAATTACTGAAAGAGGCAGAGGAAGAGTACGGATTTGATCAGAAGGGGACCATCGCTATTCCTTGCCACGTGGAGGAGTTTC
GGCACGTGCAGGGGATGATTGATCGTGAAAATTCATTCCACCGCCGTCACAACCACCACAACCACCACGTCGGTTGCTTTCGGGTTTCATTTTGA
Protein sequenceShow/hide protein sequence
MGSGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHNHHVGCFRVSF