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Clc05G00950 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G00950
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein yippee-like
Genome locationClcChr05:678715..679605
RNA-Seq ExpressionClc05G00950
SyntenyClc05G00950
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437856.1 PREDICTED: protein yippee-like At4g27745 [Cucumis melo]2.1e-4685.85Show/hide
Query:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
Subjt:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  ITNASS
        IT+ASS
Subjt:  ITNASS

XP_022924571.1 protein yippee-like At4g27745 isoform X1 [Cucurbita moschata]2.8e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

XP_022924572.1 protein yippee-like At4g27745 isoform X2 [Cucurbita moschata]2.8e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

XP_022979315.1 protein yippee-like At4g27745 [Cucurbita maxima]2.8e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

XP_023527393.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo]2.8e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

TrEMBL top hitse value%identityAlignment
A0A1S3AV44 Protein yippee-like1.0e-4685.85Show/hide
Query:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
Subjt:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  ITNASS
        IT+ASS
Subjt:  ITNASS

A0A5A7U5X0 Protein yippee-like1.0e-4685.85Show/hide
Query:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
Subjt:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  ITNASS
        IT+ASS
Subjt:  ITNASS

A0A6J1E9D7 Protein yippee-like1.4e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

A0A6J1E9T8 Protein yippee-like1.4e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

A0A6J1ISW6 Protein yippee-like1.4e-4384.62Show/hide
Query:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SGTYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

Query:  KITN
        KITN
Subjt:  KITN

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like2.4e-2146.32Show/hide
Query:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT
        ++YSC++C   ++  ++I+SK F    G+A+LF +  NV  G  + +M+++G + V D+FC  CG I+GWKY  A++ SQKYKEGK VLE+FKIT
Subjt:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT

Q9C777 Protein yippee-like At3g112301.4e-2144.57Show/hide
Query:  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C +CG  +GWKY  A++ +QKYKEGK VLE++K+
Subjt:  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

Q9FN32 Protein yippee-like At5g539403.1e-2144.79Show/hide
Query:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        R Y C+ CR  ++  DD++S+ F   RG+A+LF  + N+  G  +E++++SG + V D+FCC CGQ +GWKY  A++ +QKYKEGK VLE+ +I +
Subjt:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

Q9SR97 Protein yippee-like At3g089901.4e-2148.39Show/hide
Query:  LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC  CG ++GWKY  AYD SQKYKEGK +LE+FK+
Subjt:  LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

Q9T096 Protein yippee-like At4g277451.4e-2654.46Show/hide
Query:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        MA  I  RLYSC NCRN +  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  I
        I
Subjt:  I

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein4.0e-2446.32Show/hide
Query:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT
        ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G + V D+FC  CG I+GWKY  A++ +QKYKEGK VLE+FKI+
Subjt:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT

AT2G40110.2 Yippee family putative zinc-binding protein5.8e-2345.65Show/hide
Query:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G + V D+FC  CG I+GWKY  A++ +QKYKEGK VLE+F
Subjt:  RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

AT3G08990.1 Yippee family putative zinc-binding protein1.0e-2248.39Show/hide
Query:  LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC  CG ++GWKY  AYD SQKYKEGK +LE+FK+
Subjt:  LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

AT3G11230.1 Yippee family putative zinc-binding protein1.0e-2244.57Show/hide
Query:  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C +CG  +GWKY  A++ +QKYKEGK VLE++K+
Subjt:  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

AT4G27745.1 Yippee family putative zinc-binding protein1.0e-2754.46Show/hide
Query:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        MA  I  RLYSC NCRN +  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  I
        I
Subjt:  I


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTTGATCACCGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAATCTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGTCAGTGAGAGGAAGAGC
GTTCTTGTTCTACGAAGCAAGGAATGTAAGAGAGGGAATTCAACAGGAGAAGATGTTAATAAGTGGAACATATATAGTTTGTGATTTGTTTTGTTGTGAGTGTGGACAAA
TCTTGGGTTGGAAATACATCAAAGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAATGCTTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTAATTGAAAAATCATATTTAAGAACCTAACACCCCTATTCTTATTATTGTGAAATTATTATAGTTAAGAAAATCCCTGAATGATCGGCACCAATTGGCAAAAGTTGA
TCCTTTAAAAAGAACAACTTTACAAAGCTTTCTGAGTGTTGGTTTGCTTTTTCTAATAAGTGAGTGGTTTTTGTTTAGATAGAAAGAAAGAAGGTGAAGGCATCTCCATC
AATGGCGGATTTGATCACCGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAATCTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGTCAGTGAGAGGAAGAG
CGTTCTTGTTCTACGAAGCAAGGAATGTAAGAGAGGGAATTCAACAGGAGAAGATGTTAATAAGTGGAACATATATAGTTTGTGATTTGTTTTGTTGTGAGTGTGGACAA
ATCTTGGGTTGGAAATACATCAAAGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAATGCTTCTTCCTAAACTGCTTT
ACTTTATTCATTTACTCTTTATTTCCACTTTTCGTCTTTAATCACTTGCTTACAATTAGTCTTTACAACTCCTTCCTAACATTTTTCTCATCTTCTTAATTGTGCATTTC
ATCCAGGGAATTCGACATGTACCCTGTTTTTCTTTTACGACATGTAGATAAAAAATTAAACCTTTAACCTCAAACTTGATAATACAAACACTATAAACAATAACTTCG
Protein sequenceShow/hide protein sequence
MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS