| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7013843.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.2e-26 | 46.39 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMR EFKKVF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| XP_022134897.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] | 3.4e-26 | 45.36 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
N++ +AL ++DMR+EFKKVF KLR IR FEFN DALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
Query: GSGHEPDAFTYSDIIQG-----------------------YYTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK +KV++ C+LFDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQG-----------------------YYTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| XP_022929794.1 pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata] | 3.1e-27 | 46.91 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMRVEFKKVF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| XP_022992119.1 pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima] | 1.5e-26 | 46.39 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMRVEFK VF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGY-----------------------YTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGY-----------------------YTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| XP_023549441.1 pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pepo] | 3.1e-27 | 46.91 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMRVEFKKVF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KFG9 Uncharacterized protein | 1.8e-25 | 45.88 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
N++ +AL K DMRVEFKKVF KLRAI SFEF+ DALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
Query: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLL+GLFK +KV +AC+LFDKMVQ VRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| A0A5A7TE47 Pentatricopeptide repeat-containing protein | 3.1e-25 | 43.4 | Show/hide |
Query: QDKEPASKAFYKPN--IENQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN--------------------------------------------------
QD A+ + PN N++ +AL K DMRVEF+KVF KLRAI +FEFN
Subjt: QDKEPASKAFYKPN--IENQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN--------------------------------------------------
Query: --------DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANN
DALIVWEELKGSGHEPDAFTY IIQG IVYNSLL+GLFK +KV +AC+LFDKMVQ VRAS W N
Subjt: --------DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANN
Query: ILIDGLFRNGRA
ILIDGLFRNGRA
Subjt: ILIDGLFRNGRA
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| A0A6J1C0Z4 pentatricopeptide repeat-containing protein At4g01570 | 1.6e-26 | 45.36 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
N++ +AL ++DMR+EFKKVF KLR IR FEFN DALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEFN----------------------------------------------------------DALIVWEELK
Query: GSGHEPDAFTYSDIIQG-----------------------YYTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK +KV++ C+LFDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQG-----------------------YYTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| A0A6J1EPT7 pentatricopeptide repeat-containing protein At4g01570 | 1.5e-27 | 46.91 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMRVEFKKVF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| A0A6J1JWP1 pentatricopeptide repeat-containing protein At4g01570 | 7.4e-27 | 46.39 | Show/hide |
Query: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
N++ +AL KSDMRVEFK VF KLR IRSFEF NDALIVWEELK
Subjt: NQVGLAL-KSDMRVEFKKVF-KLRAIRSFEF----------------------------------------------------------NDALIVWEELK
Query: GSGHEPDAFTYSDIIQGY-----------------------YTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
GSGHEPDAFTY IIQG TIVYNSLLDGLFK ++V++AC+ FDKMVQ GVRAS W NILIDGLFRNGRA
Subjt: GSGHEPDAFTYSDIIQGY-----------------------YTIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGRA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q8VZE4 Pentatricopeptide repeat-containing protein At4g01570 | 1.2e-21 | 56.73 | Show/hide |
Query: DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFR
DALIVW+ELK SGHEPD TY +IQG TIVYN LLDG K +KV +AC+LF+KMVQ GVRAS W NILIDGLFR
Subjt: DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFR
Query: NGRA
NGRA
Subjt: NGRA
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| Q9FLJ4 Pentatricopeptide repeat-containing protein At5g61400 | 1.3e-04 | 23.61 | Show/hide |
Query: IENQVGLALKSDMRVEFKKVFKLRA---------IRSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSL
IE+QV A + +++ +++F A + + AL + E+ SG EP+ T+S +I GY + Y +L
Subjt: IENQVGLALKSDMRVEFKKVFKLRA---------IRSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSL
Query: LDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGR
+D FK + +A RL+ M++ G+ + L+DG ++ GR
Subjt: LDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGR
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| Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic | 2.4e-06 | 33.33 | Show/hide |
Query: ALIVWEELKGSGHEPDAFTYSDIIQGYYT-----------------------IVYNSLLDGLFKVQKVMKACRLFDKM-VQGVRASSWANNILIDGLFRN
A+ ++EE++ G EPD FTY+ +I + I YN+L+DG K K +A +FD+M V GV +S N LIDGL ++
Subjt: ALIVWEELKGSGHEPDAFTYSDIIQGYYT-----------------------IVYNSLLDGLFKVQKVMKACRLFDKM-VQGVRASSWANNILIDGLFRN
Query: GR
R
Subjt: GR
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| Q9SI78 Pentatricopeptide repeat-containing protein At1g62720 | 1.0e-04 | 31.19 | Show/hide |
Query: RSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNIL
R F AL V ++ G+EPD T S +I G+ ++YN+++DG K+ V A LFD+M + GVRA + N L
Subjt: RSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNIL
Query: IDGLFRNGR
+ GL +GR
Subjt: IDGLFRNGR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G62720.1 Pentatricopeptide repeat (PPR-like) superfamily protein | 7.1e-06 | 31.19 | Show/hide |
Query: RSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNIL
R F AL V ++ G+EPD T S +I G+ ++YN+++DG K+ V A LFD+M + GVRA + N L
Subjt: RSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNIL
Query: IDGLFRNGR
+ GL +GR
Subjt: IDGLFRNGR
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| AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein | 2.3e-04 | 28.85 | Show/hide |
Query: NDALIVWEELKGSGHEPDAFTYSDIIQ-----GYYT------------------IVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLF
+DAL ++ E+ G PD FTYS +I G ++ + +NSL+D K K+++A +LFD+M+Q + + N LI+G
Subjt: NDALIVWEELKGSGHEPDAFTYSDIIQ-----GYYT------------------IVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLF
Query: RNGR
+ R
Subjt: RNGR
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| AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.7e-07 | 33.33 | Show/hide |
Query: ALIVWEELKGSGHEPDAFTYSDIIQGYYT-----------------------IVYNSLLDGLFKVQKVMKACRLFDKM-VQGVRASSWANNILIDGLFRN
A+ ++EE++ G EPD FTY+ +I + I YN+L+DG K K +A +FD+M V GV +S N LIDGL ++
Subjt: ALIVWEELKGSGHEPDAFTYSDIIQGYYT-----------------------IVYNSLLDGLFKVQKVMKACRLFDKM-VQGVRASSWANNILIDGLFRN
Query: GR
R
Subjt: GR
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| AT4G01570.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 8.3e-23 | 56.73 | Show/hide |
Query: DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFR
DALIVW+ELK SGHEPD TY +IQG TIVYN LLDG K +KV +AC+LF+KMVQ GVRAS W NILIDGLFR
Subjt: DALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSLLDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFR
Query: NGRA
NGRA
Subjt: NGRA
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| AT5G61400.1 Pentatricopeptide repeat (PPR) superfamily protein | 9.2e-06 | 23.61 | Show/hide |
Query: IENQVGLALKSDMRVEFKKVFKLRA---------IRSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSL
IE+QV A + +++ +++F A + + AL + E+ SG EP+ T+S +I GY + Y +L
Subjt: IENQVGLALKSDMRVEFKKVFKLRA---------IRSFEFNDALIVWEELKGSGHEPDAFTYSDIIQGYY-----------------------TIVYNSL
Query: LDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGR
+D FK + +A RL+ M++ G+ + L+DG ++ GR
Subjt: LDGLFKVQKVMKACRLFDKMVQ-GVRASSWANNILIDGLFRNGR
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