; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G01280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G01280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionnon-specific lipid-transfer protein-like
Genome locationClcChr05:863700..865417
RNA-Seq ExpressionClc05G01280
SyntenyClc05G01280
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019070.1 Thioredoxin-like 2-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.6e-6075.68Show/hide
Query:  GIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYD
        GIF+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKK +V LCECIK SLSMIGPYD
Subjt:  GIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYD

Query:  PSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        PSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  PSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_022924453.1 non-specific lipid-transfer protein-like [Cucurbita moschata]6.5e-6276.67Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIF+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_022980045.1 non-specific lipid-transfer protein-like [Cucurbita maxima]5.5e-6175.33Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIF+ RST+G +AFVA+ +C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  EG+QFG+AF  ++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_023526882.1 non-specific lipid-transfer protein-like [Cucurbita pepo subsp. pepo]3.6e-6074.67Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIF+ RST+G +AFVA+ +C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPS SCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_038891281.1 non-specific lipid-transfer protein Cw18-like [Benincasa hispida]6.3e-7390.67Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIFN RSTMG +AFVAVL CSLMV LSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGE+PSPSCCSGVKKLVGDAKTKKDKV LCECIKKSLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIPKECGIP+QIPPIDNSTDCS VEG QFG+AFLY +GD HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

TrEMBL top hitse value%identityAlignment
A0A5A7U0R4 Non-specific lipid-transfer protein1.1e-5473.33Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG+FN RS    +AFVAVL CSLMV LSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK+L G+ KTKKDKVALCECIKKSL+MIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDP+RIPLIPK+CGI +QIPPI+NST+CS V+GFQFG+A +Y+ G  HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1ECH4 non-specific lipid-transfer protein-like3.1e-6276.67Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIF+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1FDZ9 non-specific lipid-transfer protein 3-like5.9e-5368Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGI+N R  +  + F+A+L  S+MV LSQN D+ SC+ VAQELSPCL FIKGSD  F GENP PSCCSGV KL  DAKTK DKV LCECIKKSLSMIG 
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDP+RIP IP+ CGIP+QIPPIDNST+CS VEGF+FG+    ++G+ HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1IBN9 non-specific lipid-transfer protein 3-like7.8e-5368.46Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGI+N R  +  + F+A+L  S+MV LSQN D+ SC+ VAQELSPCL FIKGSD  F GENP PSCCSGV KL  DAKTK DKV LCECIKKSLSMIG 
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHH
        YDP+RIP IP+ CGIP+QIPPIDNSTDCS VEGF+FG+    ++G+ HH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHH

A0A6J1IV21 non-specific lipid-transfer protein-like2.7e-6175.33Show/hide
Query:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSGIF+ RST+G +AFVA+ +C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  EG+QFG+AF  ++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

SwissProt top hitse value%identityAlignment
A0AT28 Non-specific lipid-transfer protein 14.7e-1535.59Show/hide
Query:  VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKEC
        V+ +  L+C +++     E   SC  V+  L PCL ++K      GG  PSP CC GVK+L G A+T  D+ A C C+K S   I    P  +  +P +C
Subjt:  VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKEC

Query:  GIPIQIPPIDNSTDCSTV
        G+ +    I  ST+C+T+
Subjt:  GIPIQIPPIDNSTDCSTV

A0AT32 Non-specific lipid-transfer protein 64.0e-1437.72Show/hide
Query:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQ
        VLV  ++V     E   SC  V  +LSPCL ++       GG  PSP CC GVKKL+  A T  D+ A C C+K +   I   + +    +P +CG+ I 
Subjt:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQ

Query:  IPPIDNSTDCSTVE
           I  ST+C+TV+
Subjt:  IPPIDNSTDCSTVE

O04004 Non-specific lipid-transfer protein6.2e-1541.49Show/hide
Query:  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS
        +C  V   L+PC GF+        G+ PS +CC+GV  L    KTK D+VA+C CIK+    I  YDP R+PL+  +CG+    P +D + DCS
Subjt:  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS

O04404 Probable non-specific lipid-transfer protein 15.2e-1438.78Show/hide
Query:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV
        E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ ++      D   +  +PK CGI   ++PPID + DC T+
Subjt:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV

P43217 Probable non-specific lipid-transfer protein (Fragment)4.0e-1438.78Show/hide
Query:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV
        E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ ++      D   +  +PK CGI   ++PPID + DC TV
Subjt:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV

Arabidopsis top hitse value%identityAlignment
AT3G08770.1 lipid transfer protein 67.5e-0829.66Show/hide
Query:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-
        +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D+  +C CIK ++    + P        +P +CG+ 
Subjt:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-

Query:  -PIQIPPIDNSTDCSTVE
         P +  P   STDC +++
Subjt:  -PIQIPPIDNSTDCSTVE

AT3G08770.2 lipid transfer protein 63.7e-0730.17Show/hide
Query:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-
        +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D+  +C CIK ++    + P        +P +CG+ 
Subjt:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-

Query:  -PIQIPPIDNSTDCST
         P +  P   STDC +
Subjt:  -PIQIPPIDNSTDCST

AT3G51600.1 lipid transfer protein 51.7e-0731.58Show/hide
Query:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPI
        V+VC L+     +E   SC  V   L  C  ++       GG  P   CCSGV++L   A+T +D+   C CI+ +   +G   +  R   +P  C + I
Subjt:  VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPI

Query:  QIPPIDNSTDCSTV
           PI   T+C+TV
Subjt:  QIPPIDNSTDCSTV

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.3e-0730.89Show/hide
Query:  VAVLVCSLMVGLSQ--NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPL-----I
        V + +C L+  +    +E   SC  V   L PC+ ++       GG  P  SCC+G++ L   A +  DK  +C CIK   S++G    S I L     +
Subjt:  VAVLVCSLMVGLSQ--NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPL-----I

Query:  PKECGIPIQIPPIDNSTDCSTVE
        P +CG+ +    ID ST+C++++
Subjt:  PKECGIPIQIPPIDNSTDCSTVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAATCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTG
TGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGT
TGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCA
AAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGGTTGAGGGCTTTCAATTTGGAACAGCTTTCTTATATGATATTGGGGATAA
CCATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGAATCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTG
TGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGT
TGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCA
AAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGGTTGAGGGCTTTCAATTTGGAACAGCTTTCTTATATGATATTGGGGATAA
CCATCATCATTGA
Protein sequenceShow/hide protein sequence
MSGIFNRRSTMGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIP
KECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH