; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G01660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G01660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:1135360..1140271
RNA-Seq ExpressionClc05G01660
SyntenyClc05G01660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597110.1 hypothetical protein SDJN03_10290, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2156.8Show/hide
Query:  MMMESTGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEA
        MM E+  NE++ KEEQ++R+          G+G      SSSSFL ++NL+FVLLSL+   S+EDSN   GE  + KE+E  TTYNIARSSV+KKDVIEA
Subjt:  MMMESTGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEA

Query:  KHESRRRLPQKSYTTIKDHRHGRKM
        K E RRR+ Q+ +TTIKDHRHGRKM
Subjt:  KHESRRRLPQKSYTTIKDHRHGRKM

KAG7028573.1 hypothetical protein SDJN02_09754, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-1954.84Show/hide
Query:  MMESTGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAK
        M E+  NE++ KEEQ++R+          G+G      SSSSFL ++NL+FVLLSL+   S+E+SN   GE  + KE+E  TTYNIARSSV+KKDVIEAK
Subjt:  MMESTGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAK

Query:  HESRRRLPQKSYTTIKDHRHGRKM
         E R R+ Q+ +TTIKDHRHGRKM
Subjt:  HESRRRLPQKSYTTIKDHRHGRKM

KGN56466.1 hypothetical protein Csa_011060 [Cucumis sativus]9.4e-3472.65Show/hide
Query:  MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRL
        M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN GNG SM+MKE+E STTYNIA+SS+RKKDVIEA+HESRR++
Subjt:  MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRL

Query:  PQKSYTTIKDHRHGRKM
        PQ+ +TTIKDHRHGRKM
Subjt:  PQKSYTTIKDHRHGRKM

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q3 Uncharacterized protein4.6e-3472.65Show/hide
Query:  MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRL
        M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN GNG SM+MKE+E STTYNIA+SS+RKKDVIEA+HESRR++
Subjt:  MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRL

Query:  PQKSYTTIKDHRHGRKM
        PQ+ +TTIKDHRHGRKM
Subjt:  PQKSYTTIKDHRHGRKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCCACCGCCGTGCTCTCCTTCCTCTGTACGTCTTCAGTCCGCCGGCCGCCCAATCCTTCGCGCCGCCGAACGCCGCCACCAACCGTCGCCCAGCTTCTGGCC
GCCTCCGTTCAGCCGTTGTCCCGCCGCTACTTTTCAGCCGCCGAGTTTCGTCGGGATTCAATTGTTTTGCCTTCCCCACAAGGGAACAACACAATTCGTTTTTTCAAGTA
AAATGATGATGGAATCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAA
GATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGTTGGCAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTAC
AACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAAGCATGAAAGTCGTCGACGATTACCTCAAAAATCTTATACAACAATAAAGGATCACA
GGCATGGGAGAAAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTCCACCGCCGTGCTCTCCTTCCTCTGTACGTCTTCAGTCCGCCGGCCGCCCAATCCTTCGCGCCGCCGAACGCCGCCACCAACCGTCGCCCAGCTTCTGGCC
GCCTCCGTTCAGCCGTTGTCCCGCCGCTACTTTTCAGCCGCCGAGTTTCGTCGGGATTCAATTGTTTTGCCTTCCCCACAAGGGAACAACACAATTCGTTTTTTCAAGTA
AAATGATGATGGAATCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAA
GATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGTTGGCAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTAC
AACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAAGCATGAAAGTCGTCGACGATTACCTCAAAAATCTTATACAACAATAAAGGATCACA
GGCATGGGAGAAAAATGTGA
Protein sequenceShow/hide protein sequence
MEAPPPCSPSSVRLQSAGRPILRAAERRHQPSPSFWPPPFSRCPAATFQPPSFVGIQLFCLPHKGTTQFVFSSKMMMESTGNENNSKEEQDLREGNGEAMESSSSSSFLQ
DLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRLPQKSYTTIKDHRHGRKM