; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G01870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G01870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L5, chloroplastic
Genome locationClcChr05:1296366..1299750
RNA-Seq ExpressionClc05G01870
SyntenyClc05G01870
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR020929 - Ribosomal protein L5, conserved site
IPR020930 - Ribosomal protein L5, bacterial-type
IPR022803 - Ribosomal protein L5 domain superfamily
IPR031309 - Ribosomal protein L5, C-terminal
IPR031310 - Ribosomal protein L5, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17619.1 50S ribosomal protein L5 [Cucumis melo var. makuwa]1.7e-13593.73Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRF+AP+ CGNP+NVA LAVRVK  ASAGGAIVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

XP_004133849.1 50S ribosomal protein L5, chloroplastic [Cucumis sativus]3.2e-13493.36Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRFAAP+ CGNP+NVA L +RVK  AS GGAIVLVEKAEAEKVNRLK+NYLEKIVPLLMDEFSY NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLEAA+NELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

XP_008438004.1 PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo]1.5e-13493.73Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

XP_022147519.1 50S ribosomal protein L5, chloroplastic [Momordica charantia]2.3e-13291.82Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC
        MA+SSLLSSA SSF+GH P FSVRF AP ACGNP+NVAPLAVRVKA+AG +IVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY NIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
        GIGDAQQNAKGLEAAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NSNSFDGHGNYSIGIREQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF

Query:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        PEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFRESSGSA +MRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

XP_038878175.1 50S ribosomal protein L5, chloroplastic [Benincasa hispida]3.7e-13895.54Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC
        MASSSLLSSATSSF+GHSPFFS RFAAPIACGNP+N+APLAVRVKAS GGAIVLV+KAEAEKVNRLK+NYLEKIVPLLMDEFSY NIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
        GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIA TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF

Query:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES GS  VMRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

TrEMBL top hitse value%identityAlignment
A0A1S3AVB4 50S ribosomal protein L5, chloroplastic7.0e-13593.73Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

A0A5A7U637 50S ribosomal protein L5, chloroplastic7.0e-13593.73Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

A0A5D3D3L2 50S ribosomal protein L5, chloroplastic8.3e-13693.73Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MASSSLLSS+TSSF+GHSPFFSVRF+AP+ CGNP+NVA LAVRVK  ASAGGAIVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

A0A6J1D186 50S ribosomal protein L5, chloroplastic1.1e-13291.82Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC
        MA+SSLLSSA SSF+GH P FSVRF AP ACGNP+NVAPLAVRVKA+AG +IVLVEKAEAEKVNRLK+NY+EKIVPLLMDEFSY NIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
        GIGDAQQNAKGLEAAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NSNSFDGHGNYSIGIREQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF

Query:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        PEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFRESSGSA +MRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

A0A6J1ECQ6 50S ribosomal protein L5, chloroplastic1.5e-12990.33Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC
        MASSS+LSSA SSF+GHSP  S RF AP A G P+ VAPL+VRVKAS GGAIVLVEKAEAEKVNRLK+NYLEKIVP+LMDEFSY+NIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
        GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF

Query:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR
        PEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMPFRES+G+A  +RKKKLKSHHFDSKSKGR+RR
Subjt:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARR

SwissProt top hitse value%identityAlignment
B8HMR6 50S ribosomal protein L51.3e-6163.84Show/hide
Query:  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLKT YLE  VP LM++F Y NIHQVPK+ KI +N G+G+A QNAK LEA++NE+A I GQ+PV TRAKK+IA FKIR+G P+GI  TLR + MY+F DR
Subjt:  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRE
        LINL LPR RDF+G+N  SFDG GNYS+G+REQ +FPEI +D++ + RGMDV I TTA TD+E + LL +MGMPFR+
Subjt:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRE

O04603 50S ribosomal protein L5, chloroplastic1.1e-9267.04Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MAS SLL S+ SSF+G       RF +P+A  +   +   PL   VK SA G  VLVEK+EAEK  RLKT YLE+I+P L +EF Y NIHQVPK++KIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDA QN KGLEAAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ +SFDG+GNYSIG+++Q 
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSG--SAGVMRKKKLKSHHFDSKSKGR
        VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMPFRE  G  +  ++RKKKLKSHHFD+K KG+
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSG--SAGVMRKKKLKSHHFDSKSKGR

P73308 50S ribosomal protein L54.9e-6163.64Show/hide
Query:  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLKT Y E I+P L +EF Y NIHQVPK+ K+ VN G+G+A QNAK LE+++ ELA+ITGQ+PV TRA+K+IA FKIREG P+G+  TLR   MY+FLDR
Subjt:  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR
        LINL LPR RDF+G++ NSFDG GNYS+GIREQ +FPEI +DT+ + RGMDV I T+A+TD+E + LL  +GMPFR
Subjt:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR

P82192 50S ribosomal protein L5, chloroplastic7.6e-9470.3Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC
        MAS+SLL S +SSF G      VRF    +      V   +  VKA+AG A V V+KAEAE +NRLKTNY+EK+VPLL +EFSY+NI +VPK+ KIVVNC
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF
        GIGDA QNAKGL+AA+NELA ITGQRPVKT+AK SIA FK+REG  LGIA TLRGN+MYSFLDRLINL LPRTRDFQG+N NSFDGHGNYS+G REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVF

Query:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGR
        PEIK + +GK RGMDVCITTTA+TD+EA +LL+LMGMPFRE SG + ++RKKKLKSHHFD+K KGR
Subjt:  PEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGR

Q9ZST0 50S ribosomal protein L5, chloroplastic4.0e-7960.89Show/hide
Query:  PFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE
        P  ++R AA  A   P   AP       ++   IVLV+  EA+KV+RLK  Y +K+VPL+ +EF Y N+HQVPK+EKIVVNCG+G    N+KGLE+AM +
Subjt:  PFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE

Query:  LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCI
        LA ITGQ PVKT+AKKS+A+FKIREG  +GIA TLRG VM++FLDRLINLGLPRT DF G+N NSFDGHGN++IG+R+Q VFPEI ++  GK  GMDVCI
Subjt:  LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCI

Query:  TTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGR
         TTA+TD EA RLL L+GMPF E   S+ V+RKK+LK HHF SK +GR
Subjt:  TTTAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGR

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.8e-0528.23Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGIREQSVFPEIKFDTLGKPRGMD
         GI+E  +   IK+D      GMD
Subjt:  IGIREQSVFPEIKFDTLGKPRGMD

AT3G58700.1 Ribosomal L5P family protein1.8e-0528.23Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGIREQSVFPEIKFDTLGKPRGMD
         GI+E  +   IK+D      GMD
Subjt:  IGIREQSVFPEIKFDTLGKPRGMD

AT4G01310.1 Ribosomal L5P family protein7.8e-9467.04Show/hide
Query:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV
        MAS SLL S+ SSF+G       RF +P+A  +   +   PL   VK SA G  VLVEK+EAEK  RLKT YLE+I+P L +EF Y NIHQVPK++KIVV
Subjt:  MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS
        NCGIGDA QN KGLEAAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ +SFDG+GNYSIG+++Q 
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSG--SAGVMRKKKLKSHHFDSKSKGR
        VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMPFRE  G  +  ++RKKKLKSHHFD+K KG+
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSG--SAGVMRKKKLKSHHFDSKSKGR

AT4G18730.1 ribosomal protein L16B1.8e-0528.23Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGIREQSVFPEIKFDTLGKPRGMD
         GI+E  +   IK+D      GMD
Subjt:  IGIREQSVFPEIKFDTLGKPRGMD

AT5G45775.1 Ribosomal L5P family protein1.8e-0528.23Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGIREQSVFPEIKFDTLGKPRGMD
         GI+E  +   IK+D      GMD
Subjt:  IGIREQSVFPEIKFDTLGKPRGMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTCTTCGTTGTTGAGCTCTGCTACGTCGTCGTTTTACGGTCATTCCCCATTCTTCTCGGTCCGTTTTGCTGCACCGATTGCCTGCGGAAACCCTAACAATGT
AGCTCCATTGGCGGTGAGAGTAAAAGCCTCGGCTGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAAACCAATTACCTTGAGAAAA
TCGTGCCGCTGCTTATGGATGAATTCTCCTACGCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAG
GGTTTGGAAGCCGCGATGAATGAGTTGGCATCCATTACAGGACAGCGACCTGTGAAAACACGCGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACT
TGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGTTGCCTAGAACAAGGGACTTTCAGGGACTGAACTCAAATAGCT
TTGATGGACATGGAAATTACTCCATCGGTATCCGTGAACAGAGCGTGTTCCCAGAAATAAAGTTCGATACACTTGGCAAACCAAGGGGAATGGACGTTTGCATCACAACA
ACAGCTGAAACCGATCAAGAAGCCCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTAGTGGTTCTGCAGGTGTGATGAGGAAAAAGAAGCTAAAGTCCCA
CCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTCCCTAAGTTTTTTCTTTCAATTTCGGGTATTCATCCATAAGCTCCACTATCTCAGGCCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTTCTTCGTTGTTGAGCTCTGCTACGTCGTCGTTTTACGGTCATTCCCCATTCTTCTCGGTCCGTTTTGCTGCACCGATTGCCTGCGGAAACCCTAACAATGT
AGCTCCATTGGCGGTGAGAGTAAAAGCCTCGGCTGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAAACCAATTACCTTGAGAAAA
TCGTGCCGCTGCTTATGGATGAATTCTCCTACGCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAG
GGTTTGGAAGCCGCGATGAATGAGTTGGCATCCATTACAGGACAGCGACCTGTGAAAACACGCGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACT
TGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGTTGCCTAGAACAAGGGACTTTCAGGGACTGAACTCAAATAGCT
TTGATGGACATGGAAATTACTCCATCGGTATCCGTGAACAGAGCGTGTTCCCAGAAATAAAGTTCGATACACTTGGCAAACCAAGGGGAATGGACGTTTGCATCACAACA
ACAGCTGAAACCGATCAAGAAGCCCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTAGTGGTTCTGCAGGTGTGATGAGGAAAAAGAAGCTAAAGTCCCA
CCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTCCCTAAGTTTTTTCTTTCAATTTCGGGTATTCATCCATAAGCTCCACTATCTCAGGCCTCTCTAA
Protein sequenceShow/hide protein sequence
MASSSLLSSATSSFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAK
GLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITT
TAETDQEAQRLLALMGMPFRESSGSAGVMRKKKLKSHHFDSKSKGRARRSLSFFFQFRVFIHKLHYLRPL