CuGenDBv2

Gene ID	Clc05G02120
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein PAIR1 isoform X1
Genome location	ClcChr05:1447920..1452210
RNA-Seq Expression	Clc05G02120
Synteny	Clc05G02120
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134325.2 putative recombination initiation defects 3 [Cucumis sativus]

2.5e-155

74.81

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF P+SYS+ED Q+ +SKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL SDILQLNKGMKQVSLDVE IWQKML+NSSSLQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++CTLKNPLQKFPP SIQSPE              C I                      
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRH
                     QSA+PNVC +AT VQKEEVG WKSVKVGK FCTSSVVK+DDP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ 
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRH

Query:  LHLSS
        +H  S
Subjt:  LHLSS

XP_008438047.1 PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]

4.2e-155

73.26

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLVNSS LQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V                   P    H
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL
        R       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ +
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL

Query:  -HLSSPIRRPLAEREIEGQERYKEEVSTPL
         + S    +    R +    R K + S P+
Subjt:  -HLSSPIRRPLAEREIEGQERYKEEVSTPL

XP_008438048.1 PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]

1.7e-156

73.43

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLVNSS LQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V                   P    H
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-
        R       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ + 
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-

Query:  HLSSPIRRPLAEREIEGQERYKEEVSTPL
        + S    +    R +    R K + S P+
Subjt:  HLSSPIRRPLAEREIEGQERYKEEVSTPL

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

1.6e-162

77.86

Show/hide

Query:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS
        RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TPLPDS
Subjt:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD
        KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLVNSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDA+QERL+EIS+
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD

Query:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM
        VLSSLEKQVQASQLKLKNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+           +P    HR       C 
Subjt:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM

Query:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-HLSSPIRRP
           QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT SV KKDDPKKVIPFSE Q LVLEREYRVIVDSDEEIERSFSCLIEEKKTG  + + S    + 
Subjt:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-HLSSPIRRP

Query:  LAEREIEGQERYKEEVSTPL
         + R +    R K +   P+
Subjt:  LAEREIEGQERYKEEVSTPL

XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]

6.5e-164

78.04

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Query:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS
        RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TPLPDS
Subjt:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD
        KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLVNSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDA+QERL+EIS+
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD

Query:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM
        VLSSLEKQVQASQLKLKNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+           +P    HR       C 
Subjt:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM

Query:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-HLSSPIRRPL
           QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT SV KKDDPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG  + + S    +  
Subjt:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-HLSSPIRRPL

Query:  AEREIEGQERYKEEVSTPL
        + R +    R K +   P+
Subjt:  AEREIEGQERYKEEVSTPL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV35 protein PAIR1 isoform X2

2.0e-155

73.26

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLVNSS LQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V                   P    H
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL
        R       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ +
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL

Query:  -HLSSPIRRPLAEREIEGQERYKEEVSTPL
         + S    +    R +    R K + S P+
Subjt:  -HLSSPIRRPLAEREIEGQERYKEEVSTPL

A0A1S3AVJ5 protein PAIR1 isoform X3

8.3e-157

73.43

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLVNSS LQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V                   P    H
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-
        R       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ + 
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHL-

Query:  HLSSPIRRPLAEREIEGQERYKEEVSTPL
        + S    +    R +    R K + S P+
Subjt:  HLSSPIRRPLAEREIEGQERYKEEVSTPL

A0A1S4DSK1 protein PAIR1 isoform X1

2.7e-155

73.09

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        +W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLVNSS LQSMNK+HDDMKA +DGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISD LSSLEKQVQASQLKLKNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V                   P    H
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRH
        R       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+ 
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRH

Query:  L-HLSSPIRRPLAEREIEGQERYKEEVSTPL
        + + S    +    R +    R K + S P+
Subjt:  L-HLSSPIRRPLAEREIEGQERYKEEVSTPL

A0A6J1FTV4 protein PAIR1 isoform X2

3.5e-155

73.99

Show/hide

Query:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS
        RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTPLPDS
Subjt:  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD
        KCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++VNSS LQSMNKEHDDMK+TLDGGFKLISD LKKDA+QERLHEISD
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISD

Query:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM
        VLS+LEKQVQASQLKL+NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                            +   L V    R+     +C 
Subjt:  VLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCM

Query:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHLHL-SSPIRRPL
           QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCTS+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG  +   S    +  
Subjt:  NFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHLHL-SSPIRRPL

Query:  AEREIEGQERYKEEVSTPL
         ER +    R K +   P+
Subjt:  AEREIEGQERYKEEVSTPL

A0A6J1FY69 protein PAIR1 isoform X1

4.5e-155

72.26

Show/hide

Query:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ
        +++++     RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQ
Subjt:  AVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQ

Query:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA
        RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++VNSS LQSMNKEHDDMK+TLDGGFKLISD LKKDA
Subjt:  RWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDA

Query:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH
        +QERLHEISDVLS+LEKQVQASQLKL+NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                            +   L V    
Subjt:  HQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFH

Query:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHLH
        R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCTS+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG  + 
Subjt:  RKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHLH

Query:  L-SSPIRRPLAEREIEGQERYKEEVSTPL
          S    +   ER +    R K +   P+
Subjt:  L-SSPIRRPLAEREIEGQERYKEEVSTPL

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

1.5e-51

34.8

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Query:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQV
        Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S   P+++ RED Q+  S+SS+ L++RW S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQV

Query:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLSS
         EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SLQ + KE  D KA+LDGG K I +   KD +QE+L +I  +L++
Subjt:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLSS

Query:  LEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWM--FHRKSDIDVKCMNF
        + +QV+ +  K++ +   TFT+E++ ++ +L+ P  +   R   +P+V+              +L  +   +    V   P     F  +     K  +F
Subjt:  LEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWM--FHRKSDIDVKCMNF

Query:  SQSA----------SPN----VCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTGR
          +           +PN      ++     K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  FSCLI E   G 
Subjt:  SQSA----------SPN----VCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTGR

Query:  HLHLSSPIRRPLAEREIEGQERYKEEVSTPL
        +    +       ER +    R K +   P+
Subjt:  HLHLSSPIRRPLAEREIEGQERYKEEVSTPL

Q75RY2 Protein PAIR1

9.1e-20

32.84

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Query:  APQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLP
        A Q RSQP   SQQSFSQG S+   H   SQ SQ S D+ +       T +QRF   D  +    +   +  S +RE+ Q+ L+K  ++   RW  +   
Subjt:  APQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLP

Query:  DSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLK-KDAHQERLH
            QV  E+++R+   + +S++K G ++DS+ SD++QLN+ MK+ SLD   I QK+ V  SSLQ + K  DD+KA      K   D     ++   +L+
Subjt:  DSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLK-KDAHQERLH

Query:  EISDVLSSLEKQVQASQLKLKNDFI----STFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVL
        EIS  L++L+ Q+QA QL+     +    ++ + E+ + + TL+  +Q    R ++    R  TK    V+
Subjt:  EISDVLSSLEKQVQASQLKLKNDFI----STFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVL

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

1.1e-52

34.8

Show/hide

Query:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQV
        Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S   P+++ RED Q+  S+SS+ L++RW S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQV

Query:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLSS
         EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SLQ + KE  D KA+LDGG K I +   KD +QE+L +I  +L++
Subjt:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLSS

Query:  LEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWM--FHRKSDIDVKCMNF
        + +QV+ +  K++ +   TFT+E++ ++ +L+ P  +   R   +P+V+              +L  +   +    V   P     F  +     K  +F
Subjt:  LEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWM--FHRKSDIDVKCMNF

Query:  SQSA----------SPN----VCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTGR
          +           +PN      ++     K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  FSCLI E   G 
Subjt:  SQSA----------SPN----VCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTGR

Query:  HLHLSSPIRRPLAEREIEGQERYKEEVSTPL
        +    +       ER +    R K +   P+
Subjt:  HLHLSSPIRRPLAEREIEGQERYKEEVSTPL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAATTGCAAGCTGAATACGCTGTAAACTTGATCCGATCTCTTGAGTTGAGGTCAAATGCATTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCA
ACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACC
GAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAA
TCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCA
CAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAG
AGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCACACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCT
TCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCA
GAAATTTCCACCTCGCTCTATCCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATT
TAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCATCGCAAAAGCGACATCGATGTAAAATGTATGAATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGA
GCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCC
ATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGAA
GGCACCTCCACCTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGGTCAAGAAAGATATAAAGAAGAGGTCTCAACTCCACTACAAGAAGATTGGTTG
CTCTCTACTTCCTCATTCTCATCCTCGGATTCTTCCTATACCATTACTTTCGGTATTGAGGTTGAACTCCGTTTTCCCGTGAAAATGAATCTAACTTCAAGGAGCCTAGG
AGATACATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKLQAEYAVNLIRSLELRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWK
STPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLS
SLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNFSQSASPNVCIR
ATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGRHLHLSSPIRRPLAEREIEGQERYKEEVSTPLQEDWL
LSTSSFSSSDSSYTITFGIEVELRFPVKMNLTSRSLGDT

Clc05G02120 (gene) of Watermelon (cordophanus) v2 genome