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Clc05G02880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G02880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:1958976..1959323
RNA-Seq ExpressionClc05G02880
SyntenyClc05G02880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56588.1 hypothetical protein Csa_009583 [Cucumis sativus]1.1e-2270.1Show/hide
Query:  MMEKGVEPNEVRRRQRWSQIGRSYEEENREKINRPRCETTRRRKLCSGRNAPTSATTLKYRRRFSQRAFVSNFFYRLKENEIIFNGKVKNELISPQK
        MMEKGVEPNEVRRRQRWSQIGRSYEEEN  K      +  RRRK CSG NAPTSATTLKYRRRFSQR FVS      +E+EIIFNG  +   IS QK
Subjt:  MMEKGVEPNEVRRRQRWSQIGRSYEEENREKINRPRCETTRRRKLCSGRNAPTSATTLKYRRRFSQRAFVSNFFYRLKENEIIFNGKVKNELISPQK
TrEMBL top hitse value%identityAlignment
A0A0A0L4D2 Uncharacterized protein5.4e-2370.1Show/hide
Query:  MMEKGVEPNEVRRRQRWSQIGRSYEEENREKINRPRCETTRRRKLCSGRNAPTSATTLKYRRRFSQRAFVSNFFYRLKENEIIFNGKVKNELISPQK
        MMEKGVEPNEVRRRQRWSQIGRSYEEEN  K      +  RRRK CSG NAPTSATTLKYRRRFSQR FVS      +E+EIIFNG  +   IS QK
Subjt:  MMEKGVEPNEVRRRQRWSQIGRSYEEENREKINRPRCETTRRRKLCSGRNAPTSATTLKYRRRFSQRAFVSNFFYRLKENEIIFNGKVKNELISPQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGAAAGGAGTGGAGCCCAACGAAGTGAGAAGGAGACAGAGATGGTCGCAGATCGGTAGGTCCTACGAAGAAGAAAATCGAGAGAAAATAAATCGACCACGATG
TGAAACAACTCGTCGGAGAAAACTGTGCAGCGGCCGAAACGCCCCCACGTCGGCGACCACTCTTAAATATCGCCGACGGTTTTCACAGCGAGCCTTTGTGTCGAATTTTT
TCTACAGATTAAAAGAAAATGAAATTATCTTCAATGGGAAAGTCAAAAACGAACTGATTTCGCCGCAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGCGTTTGCTTGTGCTTGCTGGCTGGCTGGCTGGCTTGATTACACTGCGAAATGATGGAGAAAGGAGTGGAGCCCAACGAAGTGAGAAGGAGACAGAGATGGTCGCA
GATCGGTAGGTCCTACGAAGAAGAAAATCGAGAGAAAATAAATCGACCACGATGTGAAACAACTCGTCGGAGAAAACTGTGCAGCGGCCGAAACGCCCCCACGTCGGCGA
CCACTCTTAAATATCGCCGACGGTTTTCACAGCGAGCCTTTGTGTCGAATTTTTTCTACAGATTAAAAGAAAATGAAATTATCTTCAATGGGAAAGTCAAAAACGAACTG
ATTTCGCCGCAAAAGTAA
Protein sequenceShow/hide protein sequence
MMEKGVEPNEVRRRQRWSQIGRSYEEENREKINRPRCETTRRRKLCSGRNAPTSATTLKYRRRFSQRAFVSNFFYRLKENEIIFNGKVKNELISPQK