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Clc05G03000 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G03000
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:2060582..2061324
RNA-Seq ExpressionClc05G03000
SyntenyClc05G03000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049039.1 hypothetical protein E6C27_scaffold171G002650 [Cucumis melo var. makuwa]7.2e-2564.75Show/hide
Query:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL
        F+   K ARLAQSVERKALNLVVVGS+PTVGE LG+       + ARLAQ VERKALNLVVVGS+PTVGEG           G ++      F    ARL
Subjt:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL

Query:  AQLVERKALNLVVVGSSPTVGE
        AQLVERKALNLVVVGSSPTVGE
Subjt:  AQLVERKALNLVVVGSSPTVGE
TYK17525.1 hypothetical protein E5676_scaffold434G003940 [Cucumis melo var. makuwa]7.9e-2463.93Show/hide
Query:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL
        F+   K ARLAQSVERKAL LVVVGS+PTVGE LG+       + ARLAQ VERKALNLVVVGS+PTVGEG           G ++      F    ARL
Subjt:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL

Query:  AQLVERKALNLVVVGSSPTVGE
        AQLVERKALNLVVVGSSPTVGE
Subjt:  AQLVERKALNLVVVGSSPTVGE
TrEMBL top hitse value%identityAlignment
A0A5A7U6B3 Uncharacterized protein3.5e-2564.75Show/hide
Query:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL
        F+   K ARLAQSVERKALNLVVVGS+PTVGE LG+       + ARLAQ VERKALNLVVVGS+PTVGEG           G ++      F    ARL
Subjt:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL

Query:  AQLVERKALNLVVVGSSPTVGE
        AQLVERKALNLVVVGSSPTVGE
Subjt:  AQLVERKALNLVVVGSSPTVGE
A0A5D3D1C1 Uncharacterized protein3.8e-2463.93Show/hide
Query:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL
        F+   K ARLAQSVERKAL LVVVGS+PTVGE LG+       + ARLAQ VERKALNLVVVGS+PTVGEG           G ++      F    ARL
Subjt:  FNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEG-----------GLFIN-----FYYLMARL

Query:  AQLVERKALNLVVVGSSPTVGE
        AQLVERKALNLVVVGSSPTVGE
Subjt:  AQLVERKALNLVVVGSSPTVGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGCGCCCCACGGTGGGGGGAGATAGGTTCAATTATGTCATCAAGAATGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTC
GAGCCCCACGGTGGGCGAAGATCTTGGAACTGTTAGGTTCAATCTCATCAATCAGATGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGG
GTTCGAGCCCCACGGTGGGCGAAGGTGGACTTTTTATAAATTTTTACTATCTCATGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGT
TCGAGCCCCACGGTGGGCGAAGATGGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGCGCCCCACGGTGGGGGGAGATAGGTTCAATTATGTCATCAAGAATGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTC
GAGCCCCACGGTGGGCGAAGATCTTGGAACTGTTAGGTTCAATCTCATCAATCAGATGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGG
GTTCGAGCCCCACGGTGGGCGAAGGTGGACTTTTTATAAATTTTTACTATCTCATGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGT
TCGAGCCCCACGGTGGGCGAAGATGGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAA
Protein sequenceShow/hide protein sequence
MGLRPTVGGDRFNYVIKNARLAQSVERKALNLVVVGSSPTVGEDLGTVRFNLINQMARLAQLVERKALNLVVVGSSPTVGEGGLFINFYYLMARLAQLVERKALNLVVVG
SSPTVGEDGPSSSVGRAQGS