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Clc05G03340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G03340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEF-hand domain-containing protein
Genome locationClcChr05:2287391..2291193
RNA-Seq ExpressionClc05G03340
SyntenyClc05G03340
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049065.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]7.7e-4356.57Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV
        MGQA+  F GKGWR  QL+KITDRIFD+      GD +P K L  ATLLVYN+INK   G + +PPT    +K V++ +EK+I+ SD N DQ I+R+EF+
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV

Query:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
         FIL  T + +  VR+R  ILTLVVAP  A+VTKK  EG+PGVGK VQKLP SAYA+LVT+ A+ FQN+K++LL+
Subjt:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

XP_008438213.1 PREDICTED: uncharacterized protein LOC103483386 [Cucumis melo]9.1e-4457.14Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV
        MGQA+  F GKGWR  QL+KITDRIFD+      GD +P K L  ATLLVYN+INKL  G + +PPT    +K V++ +EK+I+ SD N DQ I+R+EF+
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV

Query:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
         FIL  T + +  VR+R  ILTLVVAP  A+VTKK  EG+PGVGK VQKLP SAYA+LVT+ A+ FQN+K++LL+
Subjt:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

XP_022146952.1 uncharacterized protein LOC111016024 [Momordica charantia]8.0e-4060.48Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDK--LPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTF
        MGQ L    GK WR  Q+RKI+D+IF++ +N  H DK  L  +DLY ATLLVYNEINK   G +HDPP+    +ERV +LI+ SD+N DQ IDR+EF+ F
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDK--LPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTF

Query:  ILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNA
        IL  T++T   V Q   +LTLVVAP VAVVTKK  EGVPGVGK VQKLP S YA L+TLAAL FQNA
Subjt:  ILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNA

XP_038876686.1 uncharacterized protein LOC120069050 [Benincasa hispida]6.1e-4864.33Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL
        MGQ+L  F GK WR +QLRKI+++IFD+F+NQ H DKL  +DLY ATLLVYN+INK   G + DPPT    +ERV++LI+ SD + D+ IDR+EF+ FIL
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL

Query:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
        S T++TF  V QR  ILTLVVAP VAVVTKK  EGVPG+GKFVQKLP SAYA LVTLAAL+FQN+++QLL+
Subjt:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

XP_038892374.1 uncharacterized protein LOC120081499 [Benincasa hispida]1.1e-6073.68Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL
        MGQAL TF GK WR KQLRKITDRIFD+FQ Q H DKLPA+DLY ATLLVYNEINKL  G + DPPT +RV+ERV++LI+ SD+N DQYIDR EF+ FIL
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL

Query:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
        S T+ETFK V QR SILTLVVAP VAVVTKK  E +PGVGK VQKLPVSAYA LVTLAAL+FQ +++QLL+
Subjt:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

TrEMBL top hitse value%identityAlignment
A0A1S3AWG2 uncharacterized protein LOC1034833864.4e-4457.14Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV
        MGQA+  F GKGWR  QL+KITDRIFD+      GD +P K L  ATLLVYN+INKL  G + +PPT    +K V++ +EK+I+ SD N DQ I+R+EF+
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV

Query:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
         FIL  T + +  VR+R  ILTLVVAP  A+VTKK  EG+PGVGK VQKLP SAYA+LVT+ A+ FQN+K++LL+
Subjt:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

A0A5A7U485 EF-hand domain-containing protein6.6e-4057.89Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL
        MGQAL  F G+ W+ KQL  I+++IFD+F    H +KL  +DLY ATLLV+N+INK   G + DPPT++RV E VEK    SD N +Q IDRDEF+ FI 
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL

Query:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
          T E+   V QR  I+TLVVAP +AVVTK+  EG+PG+GK VQK+P SAYA+LVTLAALLFQN+ +QLL+
Subjt:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

A0A5A7U613 Calcium-binding EF-hand3.7e-4356.57Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV
        MGQA+  F GKGWR  QL+KITDRIFD+      GD +P K L  ATLLVYN+INK   G + +PPT    +K V++ +EK+I+ SD N DQ I+R+EF+
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPT----EKRVEERVEKLIEASDINNDQYIDRDEFV

Query:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
         FIL  T + +  VR+R  ILTLVVAP  A+VTKK  EG+PGVGK VQKLP SAYA+LVT+ A+ FQN+K++LL+
Subjt:  TFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

A0A6J1D109 uncharacterized protein LOC1110160243.9e-4060.48Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDK--LPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTF
        MGQ L    GK WR  Q+RKI+D+IF++ +N  H DK  L  +DLY ATLLVYNEINK   G +HDPP+    +ERV +LI+ SD+N DQ IDR+EF+ F
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDK--LPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTF

Query:  ILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNA
        IL  T++T   V Q   +LTLVVAP VAVVTKK  EGVPGVGK VQKLP S YA L+TLAAL FQNA
Subjt:  ILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNA

A0A6J1IGT6 uncharacterized protein LOC1114727548.6e-4052.63Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL
        MGQ L  F GK WR+K+L+ I++RIFD+ + Q   ++L  ++LY ATLLV+N+INKL  G +HDPP+     E  ++LI A D N ++ ID +EF  F++
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL

Query:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ
          T+ETFK V Q+  +LTLV+AP +AV TKKR EG PGVGK VQKLP SAYA ++TLAA+LFQ++ + LL+
Subjt:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64850.1 Calcium-binding EF hand family protein4.8e-3551.25Show/hide
Query:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL
        MGQ      GK WR KQ++ I DR+FD+F+ Q     L  ++LY A LLVYN+INK   G + DPP+    ++ V  ++   DIN D  +DR+EFV FI 
Subjt:  MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFIL

Query:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAAL
          TAETF +V Q   I+ L+VAP VA+ TKK  EGVPGVGK VQKLP S YA LVTLA +
Subjt:  SFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAAGCATTATGTACATTCGCAGGCAAAGGATGGAGGGTTAAGCAATTGAGGAAGATAACAGATAGAATATTTGATCAGTTTCAAAATCAACTTCATGGTGATAA
GCTGCCGGCTAAAGATCTGTACGCCGCTACGTTACTTGTATACAATGAAATTAATAAGCTGTGCCTCGGAGGGTATCATGATCCTCCCACGGAGAAACGTGTTGAAGAAC
GTGTCGAGAAACTCATAGAGGCCAGCGATATAAACAATGACCAATATATTGACCGTGACGAATTTGTGACATTCATACTGAGTTTCACGGCTGAGACGTTCAAATTAGTG
AGACAGAGATTTTCGATCCTCACTTTGGTGGTAGCACCAATCGTCGCAGTGGTCACAAAGAAAAGGGCTGAAGGCGTTCCGGGCGTTGGAAAATTTGTGCAAAAGCTTCC
TGTTTCAGCATATGCCGTTCTCGTCACCCTTGCTGCTCTCCTATTTCAAAATGCTAAGCGGCAGCTTCTTCAACGATAA
mRNA sequenceShow/hide mRNA sequence
GAAGGTCGCTTTATTCCGAGTTTCCTTTCGAACAGAAAAAGAAAATGTGAGGCAGAAGCAGAATAGTTTCTGAATTTCATCTTTTTTTCTAAATACAAAACCTCTGGAAA
TGATAAATTTCCGCTATCGTTGCTGCTACGGCGGACATTTCAATCCTCCTTTGCCCGTAGCGCCGATTTCAATTACAGCCGTAGGCTGCTTTGCGAGGTTTGTGATCTTC
AATCACCGTCGGCGCGGTTAAGCATGGGACAAGCATTATGTACATTCGCAGGCAAAGGATGGAGGGTTAAGCAATTGAGGAAGATAACAGATAGAATATTTGATCAGTTT
CAAAATCAACTTCATGGTGATAAGCTGCCGGCTAAAGATCTGTACGCCGCTACGTTACTTGTATACAATGAAATTAATAAGCTGTGCCTCGGAGGGTATCATGATCCTCC
CACGGAGAAACGTGTTGAAGAACGTGTCGAGAAACTCATAGAGGCCAGCGATATAAACAATGACCAATATATTGACCGTGACGAATTTGTGACATTCATACTGAGTTTCA
CGGCTGAGACGTTCAAATTAGTGAGACAGAGATTTTCGATCCTCACTTTGGTGGTAGCACCAATCGTCGCAGTGGTCACAAAGAAAAGGGCTGAAGGCGTTCCGGGCGTT
GGAAAATTTGTGCAAAAGCTTCCTGTTTCAGCATATGCCGTTCTCGTCACCCTTGCTGCTCTCCTATTTCAAAATGCTAAGCGGCAGCTTCTTCAACGATAAGTTCTGCT
TCATTTCTTCCATCTATATATTCCTTGTGTGTGTGTTTGTGAACTAATTAATACTCAAATTTGAATTTACTATTTGAAGCCTTGTTTGTATTTTGTTTATGTGGCTGTTC
ATCATTTTCTTTCCCTTCATGGAGGCCCCATTCAAATTTGATTGGATCATGGCTGATAAGTTTGCTTAAATTACAAGTTTAGTTCTAAATTGATGTTTCTATCTAATAGA
TTTATGATCTTTTAGAAATATTTATTAGATTCCTAAACTTTTGATTTTGTGTCTAATAGGTTCTTGAATTTTAAAAATGTCAAGTTAGGTTTTGAACTTTTTTTTCTTTT
TCTTTTGTATGTTTAACTAGTCTATAACATGTGCGATACACTTAAAATTTATAGTTTATTTTAGTATATAGAAAGCG
Protein sequenceShow/hide protein sequence
MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFILSFTAETFKLV
RQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQR