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Clc05G03350 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G03350
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEF-hand domain-containing protein
Genome locationClcChr05:2293442..2300209
RNA-Seq ExpressionClc05G03350
SyntenyClc05G03350
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582540.1 hypothetical protein SDJN03_22542, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5155.75Show/hide
Query:  MINFSIVAATADISIFLCPHHQFQLRSEAALR------------------GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLP
        MINF IVAATA+I IFLC   +FQL+S AALR                  GKEWRDEQL+NI++ IF+   ++  +DKLSFEDLYIATLLVYNDINK LP
Subjt:  MINFSIVAATADISIFLCPHHQFQLRSEAALR------------------GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLP

Query:  GPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQ
          HLDPPT++R +ELI+                    ++D N+D  I R EF+ FILSLTSD F+S+  RL+LTLV+APT+AVVTK+STEG+P VG  VQ
Subjt:  GPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQ

Query:  KLPVSAYAFLVTLAAVTSINA-SPLL
        KLP SAYAFLVTLAA    N+  P+L
Subjt:  KLPVSAYAFLVTLAAVTSINA-SPLL

KAG7018923.1 hypothetical protein SDJN02_20800, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4955.41Show/hide
Query:  MINFSIVAATADISIFLCPHHQFQLRSEAALRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYN--------------DINKYLPGPHL
        MINF IVAATA+I IFLC   +FQL+S AALRGKEWRDEQL+NI++ IF+   ++  +DKLSFEDLYIATLL  +              DINK LP  HL
Subjt:  MINFSIVAATADISIFLCPHHQFQLRSEAALRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYN--------------DINKYLPGPHL

Query:  DPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPV
        DPPT++R +ELI+                    ++D N+D  I R EF+ FILSLTSD F+S+  RL+LTLV+APT+AVVTK+STEG+P VG  VQKLP 
Subjt:  DPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPV

Query:  SAYAFLVTLAAVTSINA-SPLL
        SAYAFLVTLAA    N+  P+L
Subjt:  SAYAFLVTLAAVTSINA-SPLL

XP_022146952.1 uncharacterized protein LOC111016024 [Momordica charantia]2.6e-4661.99Show/hide
Query:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ
        GK+WRD Q++ I++ IFNK KN S +  LSFEDLYIATLLVYN+INK LPGPH DPP+K+RV+ELI+                    +SD+N D  IDR+
Subjt:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ

Query:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINA
        EF+ FIL LTSDT ++V Q LVLTLVVAPT+AVVTKKSTEGVPGVGK VQKLP S YA L+TLAA++  NA
Subjt:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINA

XP_038876686.1 uncharacterized protein LOC120069050 [Benincasa hispida]7.0e-6072.73Show/hide
Query:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ
        GKEWRDEQL+ I+N IF+KFKN+SHRDKLSFEDLYIATLLVYNDINKY+PGPHLDPPTK+RVKELIQ                    DSD +ED  IDR+
Subjt:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ

Query:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINASPLLV
        EF+DFILSLTSDTFVSV QRL+LTLVVAPT+AVVTKKSTEGVPG+GKFVQKLP SAYAFLVTLAA+   N+   L+
Subjt:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINASPLLV

XP_038892374.1 uncharacterized protein LOC120081499 [Benincasa hispida]6.8e-4764.91Show/hide
Query:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPT----KDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGY
        GKEWRD+QL+ I + IF+KF+ ++H DKL  EDLYIATLLVYN+INK +PGPH DPPT    K+RVKELIQ                     SD+N D Y
Subjt:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPT----KDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGY

Query:  IDRQEFVDFILSLTSDTFVSVGQRL-VLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        IDR EF+ FILSLTS+TF SV QRL +LTLVVAPT+AVVTKKSTE +PGVGK VQKLPVSAYAFLVTLAA+
Subjt:  IDRQEFVDFILSLTSDTFVSVGQRL-VLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

TrEMBL top hitse value%identityAlignment
A0A0B2R1H8 EF-hand domain-containing protein9.0e-4557.74Show/hide
Query:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID
        L GKEWR  Q++ I + +F+K KN+   DKLSFEDLYIA LLVYNDINKY+PGPH DPP+KD+V+E+ Q                      D+N DG ID
Subjt:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID

Query:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        R EF DFI+ +T+DTF  V Q+L++T VVAPT+AV TKK+TEGVPGVGK VQK+P S YA LVT+AAV
Subjt:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

A0A0B2R8M0 EF-hand domain-containing protein9.0e-4558.33Show/hide
Query:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID
        L GKEWR  Q++ I + +F+K KN+   D LSFEDLYIA LLVYNDINKY+PGPH DPP+KD+V+E+ Q                      D+N DG ID
Subjt:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID

Query:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        R EF DFIL +T+DTF  V Q+L+LTLVVAPT+AV TKK+TEGVPGVG+ VQK+P S YA LVT+AAV
Subjt:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

A0A445JVV7 EF-hand domain-containing protein1.2e-4456.98Show/hide
Query:  SEAALRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNED
        S A   GKEWR  Q++ I + +F+K KN+   DKLSFEDLYIA LLVYNDINKY+PGPH DPP+KD+V+E+ Q                      D+N D
Subjt:  SEAALRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNED

Query:  GYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        G IDR EF DFI+ +T+DTF  V Q+L++T VVAPT+AV TKK+TEGVPGVGK VQK+P S YA LVT+AAV
Subjt:  GYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

A0A6J1D109 uncharacterized protein LOC1110160241.3e-4661.99Show/hide
Query:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ
        GK+WRD Q++ I++ IFNK KN S +  LSFEDLYIATLLVYN+INK LPGPH DPP+K+RV+ELI+                    +SD+N D  IDR+
Subjt:  GKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYIDRQ

Query:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINA
        EF+ FIL LTSDT ++V Q LVLTLVVAPT+AVVTKKSTEGVPGVGK VQKLP S YA L+TLAA++  NA
Subjt:  EFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINA

C6T2Q8 EF-hand domain-containing protein9.0e-4558.33Show/hide
Query:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID
        L GKEWR  Q++ I + +F+K KN+   D LSFEDLYIA LLVYNDINKY+PGPH DPP+KD+V+E+ Q                      D+N DG ID
Subjt:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID

Query:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        R EF DFIL +T+DTF  V Q+L+LTLVVAPT+AV TKK+TEGVPGVG+ VQK+P S YA LVT+AAV
Subjt:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64850.1 Calcium-binding EF hand family protein6.4e-4353.57Show/hide
Query:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID
        LRGKEWR +Q++ I + +F++FK ++ R  L+FE+LYIA LLVYNDINK LPGPH DPP+KD V                     S   D D+N DG +D
Subjt:  LRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNEDGYID

Query:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV
        R+EFV FI  +T++TF  V Q L++ L+VAPT+A+ TKK+TEGVPGVGK VQKLP S YA LVTLA +
Subjt:  RQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAV

AT4G37445.1 BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1)5.3e-0522.91Show/hide
Query:  SEAALRGKEWRDEQLKN-IANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNE
        S     GK     Q+ N +  +++ +F  ++     +F+D ++A L ++N+ N  LPG H D PT D++                   K+ FA   +  +
Subjt:  SEAALRGKEWRDEQLKN-IANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVRIVLKMSFALDSDVNE

Query:  DGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINAS
        D    ++ F++F+      +   +    ++T +V+P  A+  K++ E VP + K ++ +P   +   VT+ A+ S   S
Subjt:  DGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATTTCTCTATTGTTGCTGCTACGGCGGATATCTCAATCTTCCTTTGCCCTCACCACCAATTTCAGTTACGGTCGGAGGCCGCTTTGCGAGGCAAAGAATGGAG
GGACGAGCAATTGAAGAATATAGCAAATACAATATTTAATAAGTTTAAAAATCGATCACATAGGGATAAGCTGTCGTTTGAAGATCTGTACATTGCTACGTTACTTGTAT
ACAATGATATTAATAAGTATTTGCCTGGACCGCATCTTGATCCTCCCACAAAGGATCGTGTCAAAGAACTCATACAGGTGAAGTTCAGTGTAAACCCAGTAGGGGTGAGG
ATAGTTCTGAAAATGAGCTTTGCTTTGGACAGCGATGTGAATGAGGATGGATATATTGACCGACAAGAATTCGTGGATTTCATACTGAGCTTGACATCTGATACGTTCGT
GTCAGTGGGCCAAAGATTGGTCCTCACTTTGGTGGTAGCACCAACCATCGCAGTGGTCACAAAGAAAAGTACTGAAGGCGTTCCAGGCGTTGGAAAATTTGTGCAAAAGC
TTCCCGTTTCAGCATATGCTTTTCTCGTCACCCTTGCTGCTGTCACATCTATCAACGCCTCTCCTTTACTTGTCTCCTACTGTTTCTTCAATGAAGTGGAAATCGACCTG
ATTGATTCGATTGGCGCGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATTTCTCTATTGTTGCTGCTACGGCGGATATCTCAATCTTCCTTTGCCCTCACCACCAATTTCAGTTACGGTCGGAGGCCGCTTTGCGAGGCAAAGAATGGAG
GGACGAGCAATTGAAGAATATAGCAAATACAATATTTAATAAGTTTAAAAATCGATCACATAGGGATAAGCTGTCGTTTGAAGATCTGTACATTGCTACGTTACTTGTAT
ACAATGATATTAATAAGTATTTGCCTGGACCGCATCTTGATCCTCCCACAAAGGATCGTGTCAAAGAACTCATACAGGTGAAGTTCAGTGTAAACCCAGTAGGGGTGAGG
ATAGTTCTGAAAATGAGCTTTGCTTTGGACAGCGATGTGAATGAGGATGGATATATTGACCGACAAGAATTCGTGGATTTCATACTGAGCTTGACATCTGATACGTTCGT
GTCAGTGGGCCAAAGATTGGTCCTCACTTTGGTGGTAGCACCAACCATCGCAGTGGTCACAAAGAAAAGTACTGAAGGCGTTCCAGGCGTTGGAAAATTTGTGCAAAAGC
TTCCCGTTTCAGCATATGCTTTTCTCGTCACCCTTGCTGCTGTCACATCTATCAACGCCTCTCCTTTACTTGTCTCCTACTGTTTCTTCAATGAAGTGGAAATCGACCTG
ATTGATTCGATTGGCGCGGTCTGA
Protein sequenceShow/hide protein sequence
MINFSIVAATADISIFLCPHHQFQLRSEAALRGKEWRDEQLKNIANTIFNKFKNRSHRDKLSFEDLYIATLLVYNDINKYLPGPHLDPPTKDRVKELIQVKFSVNPVGVR
IVLKMSFALDSDVNEDGYIDRQEFVDFILSLTSDTFVSVGQRLVLTLVVAPTIAVVTKKSTEGVPGVGKFVQKLPVSAYAFLVTLAAVTSINASPLLVSYCFFNEVEIDL
IDSIGAV