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Clc05G04390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G04390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:3172981..3173746
RNA-Seq ExpressionClc05G04390
SyntenyClc05G04390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018847.1 hypothetical protein SDJN02_20720, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-1044.55Show/hide
Query:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ-EKEKVSFLELKDIPI
        MGK GR+              R + L H+++  F   S  F L   L   +E+ER   ER+R WG G F   L    GHGRS Q E+EKV FLELKDI  
Subjt:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ-EKEKVSFLELKDIPI

Query:  GPLEKPFFFV
        GP +KPFFFV
Subjt:  GPLEKPFFFV

KAG7028774.1 hypothetical protein SDJN02_09955, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1456.04Show/hide
Query:  KFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQEKEKVSFLELKDIPIGPLE
        + LL WLTWRLSI+D+LSSSDF+L S +F         +   RER    +  GLGSF   L    GHGRSKQE+EKV +LELKDI IGPLE
Subjt:  KFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQEKEKVSFLELKDIPIGPLE

KGN56758.1 hypothetical protein Csa_009575 [Cucumis sativus]4.6e-2577.38Show/hide
Query:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ
        MGKRGRKRKWKCKFLLFWLTWRLSI D LSSSDFVLP  VFFLSNKLP+ +ER  ERE   R WGLGSFPAILVSR      KQ
Subjt:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L4R3 Uncharacterized protein2.2e-2577.38Show/hide
Query:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ
        MGKRGRKRKWKCKFLLFWLTWRLSI D LSSSDFVLP  VFFLSNKLP+ +ER  ERE   R WGLGSFPAILVSR      KQ
Subjt:  MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAACGAGGAAGAAAGAGGAAGTGGAAGTGCAAGTTCCTTCTTTTCTGGCTCACATGGCGACTTTCCATTTTGGACCATCTGTCTTCTTCTGACTTCGTATTACC
CTCACCTGTGTTCTTCTTATCTAATAAACTTCCAGTTCGCAAAGAGAGAGAAAGAGAGCGAGAGGAAAGAAAGAGAGAGTGGGGTTTAGGCTCCTTTCCTGCAATCTTGG
TCTCTAGAGCGGGTCATGGAAGAAGCAAACAGGAGAAGGAGAAGGTGAGTTTTCTTGAATTGAAGGATATTCCCATTGGCCCACTTGAGAAACCTTTCTTCTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAACGAGGAAGAAAGAGGAAGTGGAAGTGCAAGTTCCTTCTTTTCTGGCTCACATGGCGACTTTCCATTTTGGACCATCTGTCTTCTTCTGACTTCGTATTACC
CTCACCTGTGTTCTTCTTATCTAATAAACTTCCAGTTCGCAAAGAGAGAGAAAGAGAGCGAGAGGAAAGAAAGAGAGAGTGGGGTTTAGGCTCCTTTCCTGCAATCTTGG
TCTCTAGAGCGGGTCATGGAAGAAGCAAACAGGAGAAGGAGAAGGTGAGTTTTCTTGAATTGAAGGATATTCCCATTGGCCCACTTGAGAAACCTTTCTTCTTTGTTTGA
Protein sequenceShow/hide protein sequence
MGKRGRKRKWKCKFLLFWLTWRLSILDHLSSSDFVLPSPVFFLSNKLPVRKEREREREERKREWGLGSFPAILVSRAGHGRSKQEKEKVSFLELKDIPIGPLEKPFFFV