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Clc05G04510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G04510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich protein
Genome locationClcChr05:3281502..3284934
RNA-Seq ExpressionClc05G04510
SyntenyClc05G04510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049179.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]2.5e-1381.32Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

KAE8650313.1 hypothetical protein Csa_010764 [Cucumis sativus]5.0e-1485.71Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

XP_008439361.1 PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]2.5e-1381.32Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

XP_011652752.1 glycine-rich protein 23 [Cucumis sativus]5.0e-1485.71Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

XP_023540607.1 glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]9.7e-1070.87Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGD---GGAG
        MLGG+AGIGKFGGIGG AGIG+ GG GG+GGGG GG GG+GG      GGA GIGGLAGHGLGGAGGIGG+AGHGL G GG+GG  G G+GG    GG+G
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGD---GGAG

Query:  GGE
        GG+
Subjt:  GGE

TrEMBL top hitse value%identityAlignment
A0A0A0L460 Uncharacterized protein2.4e-1485.71Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGGGAG     G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

A0A1S3AYL0 uncharacterized PE-PGRS family protein PE_PGRS461.2e-1381.32Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS461.2e-1381.32Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        MLGG+AGIGKFGGIGGVAGIGSLG PGGLGGG        G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+G GSG+GG GG+ GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X21.0e-0972.16Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG-GSGVGGDGGAGG
        MLGG+AGIGKFGGIGG AGIG  GG GG+GGGG GG GG+GG      GGA GIGG+ GHGLGG GGIGG+ GHGLGGAGGVGG G G  G+GG GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG-GSGVGGDGGAGG

A0A6J1IHK9 glycine-rich cell wall structural protein1.0e-0973.47Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGDGGAGG
        MLGG+AGIGKFGGIGG AGIG  GG GG+GGGG GG GG+GG      GGA GIGGLAGHGLGGAGGIGG+AGHG+GG GG+GG  G G+GG GG GG
Subjt:  MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGG------GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGG--GSGVGGDGGAGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein1.0e-0457.26Show/hide
Query:  MLGGAAGIGKFGGIGGVAGIG---SLGGPGGLG--GGGAGGAGGLGG--GGASGIGGLAGHGLGG----------AGGIGGL-----AGHGLGGAGGVGG
        ++GG  GIGK+GGIGG AGIG   S+GG GGLG  GGG GG GG+GG  GG  G+GGL G GLGG          AGGIGGL     AG GLGG GG+G 
Subjt:  MLGGAAGIGKFGGIGGVAGIG---SLGGPGGLG--GGGAGGAGGLGG--GGASGIGGLAGHGLGG----------AGGIGGL-----AGHGLGGAGGVGG

Query:  GSGVGGDGGAGGGEFVV
          G+G  GG GGG  VV
Subjt:  GSGVGGDGGAGGGEFVV

AT2G32690.1 glycine-rich protein 231.0e-0460.42Show/hide
Query:  LGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGS------GVGGDGGAGGG
        LGG +G+G  GG+GG +G+G  GG GG GGGG GG GGLGGG   G GG AG GLGG GGIGG  G G GG GG GGG+      G+GG GG GGG
Subjt:  LGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGS------GVGGDGGAGGG

AT2G32690.3 glycine-rich protein 236.5e-0461.22Show/hide
Query:  LGGAAGIGKFGGIGGVAGI---GSLGGPGGLGGG-GAGGAGGLGG----GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG
        LGG  G+G  GG+GG  G+   G LGG GGLGGG G GG GGLGG    GG  G+GG  G GLGG GG GG AG GLGG GG+GGG G GG GG G G
Subjt:  LGGAAGIGKFGGIGGVAGI---GSLGGPGGLGGG-GAGGAGGLGG----GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGGGGGTGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGCGC
CGGCGGTTTGGGTGGCGGAGGAGCTAGCGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGCGGAATAGGTGGTCTAGCTGGACATGGACTTGGTGGGGCTG
GGGGTGTTGGAGGCGGCAGTGGCGTCGGCGGAGACGGCGGAGCTGGCGGTGGAGAGTTTGTTGTGGTGTTGGTTGAAGCTCATGTAGGGATTTTGATTTTTGTGTGTTTG
CAAAAAGGTGGCGGTTTTGTGTTCAAAGTTATGCATGCATGCATGCACGGCGCCACGTCGGTAGCCAAATCAAAGGTTCCACAGCCTCTTTGTCGAGCTAAGATCTCCAC
AAATGCCATAAACGCCCAAAAGAAAATATCCCAAATTCTCTCTATAAATAACAACAACAACAACTCACTTCCTATATATCCTTATCCTAATCCCCATATGGCTCGACCCG
GAATTTTCCTCTGTTTCTTGGCTTTGATCGTAACCAGTAGCTTAGCTCAGCAGCAGCCCAACGCCGGTGGCGGCACAGAAACTATTACTGTACAAGGCGGCGGTGGCGGT
GGCGGAGGCGGAGGTGGCGGAGGTGGATCGAGTAGTGGTCCTGGCACAGGCTCCGGTGAAGGGCATGGGTCGGGGAGAGGTGGTGGGTCGGGTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGGGGGTGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGCGC
CGGCGGTTTGGGTGGCGGAGGAGCTAGCGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGCGGAATAGGTGGTCTAGCTGGACATGGACTTGGTGGGGCTG
GGGGTGTTGGAGGCGGCAGTGGCGTCGGCGGAGACGGCGGAGCTGGCGGTGGAGAGTTTGTTGTGGTGTTGGTTGAAGCTCATGTAGGGATTTTGATTTTTGTGTGTTTG
CAAAAAGGTGGCGGTTTTGTGTTCAAAGTTATGCATGCATGCATGCACGGCGCCACGTCGGTAGCCAAATCAAAGGTTCCACAGCCTCTTTGTCGAGCTAAGATCTCCAC
AAATGCCATAAACGCCCAAAAGAAAATATCCCAAATTCTCTCTATAAATAACAACAACAACAACTCACTTCCTATATATCCTTATCCTAATCCCCATATGGCTCGACCCG
GAATTTTCCTCTGTTTCTTGGCTTTGATCGTAACCAGTAGCTTAGCTCAGCAGCAGCCCAACGCCGGTGGCGGCACAGAAACTATTACTGTACAAGGCGGCGGTGGCGGT
GGCGGAGGCGGAGGTGGCGGAGGTGGATCGAGTAGTGGTCCTGGCACAGGCTCCGGTGAAGGGCATGGGTCGGGGAGAGGTGGTGGGTCGGGTCGATAG
Protein sequenceShow/hide protein sequence
MLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGAGGLGGGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGGSGVGGDGGAGGGEFVVVLVEAHVGILIFVCL
QKGGGFVFKVMHACMHGATSVAKSKVPQPLCRAKISTNAINAQKKISQILSINNNNNNSLPIYPYPNPHMARPGIFLCFLALIVTSSLAQQQPNAGGGTETITVQGGGGG
GGGGGGGGGSSSGPGTGSGEGHGSGRGGGSGR