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Clc05G04700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G04700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionlate embryogenesis abundant protein 1
Genome locationClcChr05:3424717..3425715
RNA-Seq ExpressionClc05G04700
SyntenyClc05G04700
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3486235.1 hypothetical protein F2Q69_00053541 [Brassica cretica]7.8e-1858.89Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMA GAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

XP_009102532.1 late embryogenesis abundant protein 1 [Brassica rapa]1.2e-1860Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

XP_013597327.1 PREDICTED: late embryogenesis abundant protein 1-like [Brassica oleracea var. oleracea]3.5e-1858.89Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W +S KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

XP_018432834.1 PREDICTED: late embryogenesis abundant protein 1-like [Raphanus sativus]9.2e-1960Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA+ K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

XP_022157950.1 late embryogenesis abundant protein 1 [Momordica charantia]1.4e-1965.91Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNE
        MSSMQQS +AGQS G+ +AKTE+ IESGKE AN A D A +  Q AK+SA++   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN++
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNE

TrEMBL top hitse value%identityAlignment
A0A397YQV0 Uncharacterized protein5.8e-1960Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

A0A3P6ERB9 Uncharacterized protein5.8e-1960Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

A0A6J0JD89 late embryogenesis abundant protein 1-like4.4e-1960Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA+ K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

A0A6J1DUG1 late embryogenesis abundant protein 16.9e-2065.91Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNE
        MSSMQQS +AGQS G+ +AKTE+ IESGKE AN A D A +  Q AK+SA++   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN++
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNE

M4DEV0 Uncharacterized protein5.8e-1960Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACD   N AQ  K+SA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN +KK
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKK

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 15.4e-0639.08Show/hide
Query:  EAGQSQGQAEAKTEEWIESGKEAA----NKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN
        E  Q+   A+ KT++  E+ KE A     +A +    + Q  K++A   K  ++ FLQQTGE++  MAQGA D VK T GM N+ K+
Subjt:  EAGQSQGQAEAKTEEWIESGKEAA----NKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN

O49817 Late embryogenesis abundant protein 26.0e-0536.9Show/hide
Query:  QSQGQAEAKTEEWIESGKEAA----NKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN
        Q+   A+ KT++  ++ KE A     +A +    + Q  K++A   K  ++ FLQQTGE+   MAQGA D VK T GM N+ ++
Subjt:  QSQGQAEAKTEEWIESGKEAA----NKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN

P13934 Late embryogenesis abundant protein 763.9e-0434.07Show/hide
Query:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN
        ++ +++ E     G   ++T E + +  ++AA    + A N AQ  K++A   K +T  FL QTGE +  MA GA D VK+T GM  E+++
Subjt:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN

P13939 Late embryogenesis abundant protein D-76.0e-0532.2Show/hide
Query:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKE---------------------------------AANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQ
        M+S +QS++AG+++G+A  K E+  ES KE                                 AA    D     A  A+  A +TK+ +   LQQ GE+
Subjt:  MSSMQQSFEAGQSQGQAEAKTEEWIESGKE---------------------------------AANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQ

Query:  MMNMAQGAVDTVKNTLGM
        + N AQGA D VK+T GM
Subjt:  MMNMAQGAVDTVKNTLGM

Q9LW12 Late embryogenesis abundant protein 295.1e-0433.67Show/hide
Query:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACD-------NAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN
        ++ +++ +AG    +A+ K   ++ E+G+   NKA D        A   AQ  K++A   + +T  FL QTGE +  MA GA D VK+T GM  E+++
Subjt:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACD-------NAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN

Arabidopsis top hitse value%identityAlignment
AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related5.0e-0741.11Show/hide
Query:  SSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTK-----QETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN
        SS Q S  AG+  GQ + K EE++ +   A N+  D+  + +Q    S H         + S+ +QQTG Q+ NMAQGA D VKNTLGM+
Subjt:  SSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTK-----QETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN

AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein1.4e-0434.31Show/hide
Query:  SSMQQSFEAGQS----QGQAEAKTEEWIESGK--------EAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEK
        S+ Q++ E  QS      QA   T+E  +  K        E      + A + A+  K++A   K++TS  L QTGEQ+  MA GA D VK+TLG+  ++
Subjt:  SSMQQSFEAGQS----QGQAEAKTEEWIESGK--------EAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEK

Query:  KN
         N
Subjt:  KN

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein1.4e-0434.31Show/hide
Query:  SSMQQSFEAGQS----QGQAEAKTEEWIESGK--------EAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEK
        S+ Q++ E  QS      QA   T+E  +  K        E      + A + A+  K++A   K++TS  L QTGEQ+  MA GA D VK+TLG+  ++
Subjt:  SSMQQSFEAGQS----QGQAEAKTEEWIESGK--------EAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEK

Query:  KN
         N
Subjt:  KN

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein3.6e-0533.67Show/hide
Query:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACD-------NAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN
        ++ +++ +AG    +A+ K   ++ E+G+   NKA D        A   AQ  K++A   + +T  FL QTGE +  MA GA D VK+T GM  E+++
Subjt:  SSMQQSFEAGQSQGQAEAKTEEWI-ESGKEAANKACD-------NAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein2.1e-1340.19Show/hide
Query:  QQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKD----------------------SAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNT
        QQ F AGQ++GQA+ K E+W ES K+ A  ACD   ++ Q A+D                      SA   +++ +    QTGE + NMAQGA+D VKN+
Subjt:  QQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKD----------------------SAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNT

Query:  LGMNNEK
        LGMN +K
Subjt:  LGMNNEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGA
CAACGCACCCAATGTTGCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGCAAGAAACTTCCAATTTTCTCCAACAGACCGGAGAGCAAATGATGAATATGGCTCAAG
GTGCGGTGGATACCGTGAAGAATACCCTTGGAATGAATAATGAAAAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATCCAATAAAAAGAAGAAAAAAGAAATACAAATCTATTTATTTGAAAATTAAAAACCATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGA
GGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGACAACGCACCCAATGTTGCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGC
AAGAAACTTCCAATTTTCTCCAACAGACCGGAGAGCAAATGATGAATATGGCTCAAGGTGCGGTGGATACCGTGAAGAATACCCTTGGAATGAATAATGAAAAGAAGAAT
TGAATTTTATTAGCTTATGTTTAAAAAGAATAATTAAGGATGTAAGCATAAGATGAGTTGTGGAAATCTTTATTGCATGGAAGAAATCCAACCTCTTGTAATAAAAAAGA
AACTACTTTAGTTTTTATCTTTTGCTATATTTGAAAAGAGAGTCTTTATAGTCTATCGTCTATTTGAAAAGTACTATTATTTGAACAAAAATACTCTACCGTTGAAAAAT
AATTAATATTTATTTTGATATGAAAAGTAAAATTAACTCTACAAATAAAAAATAAAGAATCATAAAAAGATTGTACTTCATCCCCTCTTTCTTAAATTTTCAAACAATGT
GAAATAGAAGGAAAAAAAAAGAAAAAAGAAAAAAACACCAAGTTCCAAAAATAGAACCAATAGCAATTGGCACATATTAATTGTTATTTTAGAAAATCACAAAATATGAT
ATTTTCCTAAAGTATAATCATGAAC
Protein sequenceShow/hide protein sequence
MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN