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Clc05G05110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G05110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEmbryo sac development arrest protein
Genome locationClcChr05:3663064..3663444
RNA-Seq ExpressionClc05G05110
SyntenyClc05G05110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56835.1 hypothetical protein Csa_009887 [Cucumis sativus]7.4e-5182.31Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQS
        M  HFH+RGLLSAGPS+KRKEPS P+A KA EPSV SNRLLAGYMAYEFLTKGTL GRKFDP R +A+PS A+    QWKKPKS+AAPPEILKKEHQIQS
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQS

Query:  YAEVATILKTTGAHISGIVNPTQLGRWLQK
        YAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  YAEVATILKTTGAHISGIVNPTQLGRWLQK

XP_008438490.1 PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo]1.8e-4983.21Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ
        M  HFH+RGLLSAGPS+KRKEPS PA P KA EPSVLSNRLLAGYMAYEFLTKGTL GRKFDP R +A+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

XP_022924296.1 uncharacterized protein LOC111431827 [Cucurbita moschata]1.1e-4680.95Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV
        M  HFH+RGLL AGPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P RA+A PS A QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

XP_022979583.1 uncharacterized protein LOC111479265 [Cucurbita maxima]1.2e-4580.16Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV
        M  HFH RGLL  GPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P +A+A PS A QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTGAHI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

XP_023526927.1 uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]2.9e-4781.75Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV
        M  HFH+RGLL AGPSRKRKE   PAA KA EPSV SNRLLAGYMAYEFLTKGT+LGR+F+P RA+A PS A QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

TrEMBL top hitse value%identityAlignment
A0A0A0L4C1 Uncharacterized protein3.6e-5182.31Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQS
        M  HFH+RGLLSAGPS+KRKEPS P+A KA EPSV SNRLLAGYMAYEFLTKGTL GRKFDP R +A+PS A+    QWKKPKS+AAPPEILKKEHQIQS
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQS

Query:  YAEVATILKTTGAHISGIVNPTQLGRWLQK
        YAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  YAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A1S3AWH5 uncharacterized protein LOC1034835718.8e-5083.21Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ
        M  HFH+RGLLSAGPS+KRKEPS PA P KA EPSVLSNRLLAGYMAYEFLTKGTL GRKFDP R +A+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A5A7U1L2 Uncharacterized protein8.8e-5083.21Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ
        M  HFH+RGLLSAGPS+KRKEPS PA P KA EPSVLSNRLLAGYMAYEFLTKGTL GRKFDP R +A+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A6J1E960 uncharacterized protein LOC1114318275.3e-4780.95Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV
        M  HFH+RGLL AGPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P RA+A PS A QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

A0A6J1IWN8 uncharacterized protein LOC1114792655.9e-4680.16Show/hide
Query:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV
        M  HFH RGLL  GPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P +A+A PS A QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTGAHI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein9.4e-1239.81Show/hide
Query:  SAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGR
        S  ++  A EP   +  +LAGY+++E+LT+GTL G +++ ARA A  S      KP     P E  + E + + Y EVA +L++ GA + GIVNP QL R
Subjt:  SAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGR

Query:  WLQ
        +L+
Subjt:  WLQ

AT3G23440.1 embryo sac development arrest 65.3e-1540.18Show/hide
Query:  GPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISG
        G SRKRK+  +      +  +   N LLAGYMA+E+LT GT+LGRK     A+  P  +          +P +  + +   QSY+EVA++ KT G H+ G
Subjt:  GPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISG

Query:  IVNPTQLGRWLQ
        +VNPTQL +W+Q
Subjt:  IVNPTQLGRWLQ

AT5G44060.1 unknown protein1.7e-1645.19Show/hide
Query:  PSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLG
        P+  A     EP V SN+LLAGY+A+EFL  GTL G  ++P +A A P T TQ   P+      +I   +H+ + Y EVA IL+  G H+ GIVNP+QL 
Subjt:  PSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLG

Query:  RWLQ
        R+L+
Subjt:  RWLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGTTGAGCCATCGGTTTTATC
CAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGCCGACGCAAGCCCATCCACCGCCACCC
AGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGGGCCCAC
ATATCCGGAATCGTTAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGTTGAGCCATCGGTTTTATC
CAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGCCGACGCAAGCCCATCCACCGCCACCC
AGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGGGCCCAC
ATATCCGGAATCGTTAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA
Protein sequenceShow/hide protein sequence
MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAH
ISGIVNPTQLGRWLQK