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Clc05G05625 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G05625
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitochondrial group I intron splicing factor like
Genome locationClcChr05:4015163..4015714
RNA-Seq ExpressionClc05G05625
SyntenyClc05G05625
Gene Ontology termsGO:0045927 - positive regulation of growth (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER54806.1 hypothetical protein STAS_32418 [Striga asiatica]6.0e-1154.39Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN++A   +R GK+CS+ ALQGF H++ DI+SGN++ K+LGIL +DM+G+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
GFZ14247.1 hypothetical protein Acr_24g0004370 [Actinidia rufa]7.0e-1261.4Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
KAA8527742.1 hypothetical protein F0562_035389 [Nyssa sinensis]1.3e-1057.89Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+C+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
PSR92891.1 Protein of unknown function DUF668 protein [Actinidia chinensis var. chinensis]7.0e-1261.4Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
XP_028113292.1 uncharacterized protein LOC114311349 [Camellia sinensis]1.3e-1057.89Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN+VAG  +R GK+CSV ALQGF H++ DIV G ++ K+LG L +DMDG+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
TrEMBL top hitse value%identityAlignment
A0A2R6PKM2 Uncharacterized protein3.4e-1261.4Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5A7RC05 Uncharacterized protein2.9e-1154.39Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN++A   +R GK+CS+ ALQGF H++ DI+SGN++ K+LGIL +DM+G+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5B7AKR0 Uncharacterized protein (Fragment)2.9e-1159.65Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GKRC+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5J5AD06 Uncharacterized protein6.4e-1157.89Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+C+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A7J0GTS7 Uncharacterized protein3.4e-1261.4Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG  +R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23160.1 Protein of unknown function (DUF668)3.4e-1250.88Show/hide
Query:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDL++VA   +R GK+C+  ALQGF H++ DIV+G ++ +KLG L +DM+ + KKM
Subjt:  LDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATGATTTGAACCAGGTGGCTGGCACTGAGGCCAGACGTGGGAAGAGATGCTCTGTTTCGGCCCTGCAGGGGTTCCACCATATACACACCGACATTGTTAGTGG
GAATCTTGAGGCGAAGAAGCTTGGGATTTTGACCCAAGACATGGACGGAATTCCGAAGAAAATGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATGATTTGAACCAGGTGGCTGGCACTGAGGCCAGACGTGGGAAGAGATGCTCTGTTTCGGCCCTGCAGGGGTTCCACCATATACACACCGACATTGTTAGTGG
GAATCTTGAGGCGAAGAAGCTTGGGATTTTGACCCAAGACATGGACGGAATTCCGAAGAAAATGGGTTAA
Protein sequenceShow/hide protein sequence
MLDDLNQVAGTEARRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKMG