; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G05845 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G05845
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationClcChr05:4202889..4205003
RNA-Seq ExpressionClc05G05845
SyntenyClc05G05845
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.3e-9590.26Show/hide
Query:  IWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRH
        IWEMF EVELVRDVE+T EKEKRD +N QRYI+TCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITF CRTFLPLEGEILHGVVRH
Subjt:  IWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRH

Query:  IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVF S + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]1.2e-9793.68Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF+EVELVRDVEIT EKEKRDA NFQRYI+TCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITFICRTFLP EGEILHGVVRHIF+RG
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVF S EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_008438585.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo]1.2e-9794.21Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF+EVELVRDVEIT EKEKRDA NFQRYI+TCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITFICRTFLP EGEILHGVVRHIF+RG
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVF S EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877102.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Benincasa hispida]1.3e-10284.55Show/hide
Query:  HFPFSSASQFSPPPFSS-----AALHFSYSVCERRIGFLLIWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKS
        HF FSS+SQFSPPP SS     A LHFSYS                 VELV+DVEITAEKEKRDALNFQRYI+TCLLENLLKEKANKDHGYFLAVTSLKS
Subjt:  HFPFSSASQFSPPPFSS-----AALHFSYSVCERRIGFLLIWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKS

Query:  IGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEK
        IGKGVV ++SQCVSFPITF CRTFLP EGEILHGVV HIFRRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVF SNEFATIGNDVVVRFSVLGVRWIEK
Subjt:  IGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEK

Query:  RGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  RGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]4.5e-10094.3Show/hide
Query:  IWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIF
        IWEMF+EVELV+DVEITAEKEKRDALNFQRYI+TCLLENLLKEKANKDHGYFLAVTSLKSIGKGVV ++SQCVSFPITF CRTFLP EGEILHGVV HIF
Subjt:  IWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIF

Query:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVF SNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein5.9e-9893.68Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF+EVELVRDVEIT EKEKRDA NFQRYI+TCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITFICRTFLP EGEILHGVVRHIF+RG
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVF S EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like5.9e-9894.21Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF+EVELVRDVEIT EKEKRDA NFQRYI+TCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITFICRTFLP EGEILHGVVRHIF+RG
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVF S EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like5.9e-9894.21Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF+EVELVRDVEIT EKEKRDA NFQRYI+TCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITFICRTFLP EGEILHGVVRHIF+RG
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVF S EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like7.5e-9390.1Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRHIFR
        MF EVELVRDVE+T EKEKRD +N QRYI+TCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVF S + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X11.9e-9189.06Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRHIFR
        MF EVELVR+VE+T EKEKRD +N QRYI+TCLLENLLKEKA+KDHGYFLAVTSLKSIGK  VKN  ESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFICRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVF S + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 72.0e-3441.99Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF +V+L  +V I AE      L  +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ F   TF   +GEI+HGVV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F++ + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P38421 DNA-directed RNA polymerase II subunit 71.4e-1126.45Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF  + L R++++      R   N +  +V+ L+++ ++   +  HG+ +A+T + +IGKG++++ +  V+FP+ + C  F P +GEIL  VV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFLSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P + +++ +  I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFLSNEFAT-IGNDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB73.7e-1227.74Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF  + L R++++      R   N +  +V+ L+++ ++   +  HG+ +AVT +++IGKG++++ +  V+FP+ + C  F P +GEIL  VV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFLSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P + +++ +  I  D  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFLSNEFAT-IGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein7.4e-3742.57Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH
        MF EVE+ RDV I A+      LN Q   + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F CRTFLP  G+IL 
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH

Query:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
        G V+ +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ S
Subjt:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS

Query:  DE
        DE
Subjt:  DE

Q8LE42 DNA-directed RNA polymerase IV subunit 73.9e-3042.46Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF +V+L  DV I AE +    L  QR IV  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F    F   +GEI+HGVV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F++   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain2.8e-3142.46Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF +V+L  DV I AE +    L  QR IV  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F    F   +GEI+HGVV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F++   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related5.2e-3842.57Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH
        MF EVE+ RDV I A+      LN Q   + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F CRTFLP  G+IL 
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH

Query:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
        G V+ +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ S
Subjt:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS

Query:  DE
        DE
Subjt:  DE

AT4G14520.2 DNA-directed RNA polymerase II-related5.2e-3842.57Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH
        MF EVE+ RDV I A+      LN Q   + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F CRTFLP  G+IL 
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH

Query:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
        G V+ +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ S
Subjt:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS

Query:  DE
        DE
Subjt:  DE

AT4G14520.3 DNA-directed RNA polymerase II-related5.2e-3842.57Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH
        MF EVE+ RDV I A+      LN Q   + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F CRTFLP  G+IL 
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQ---RYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFICRTFLPLEGEILH

Query:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
        G V+ +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ S
Subjt:  GVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS

Query:  DE
        DE
Subjt:  DE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.4e-3541.99Show/hide
Query:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG
        MF +V+L  +V I AE      L  +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ F   TF   +GEI+HGVV  + + G
Subjt:  MFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F++ + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCCATCCGCCTTTACTTTATCCACTCCAATCACAACATCCCAACGCTTTCTAATGCCCGCCCATTTTCCTTTCTCTAGTGCTTCGCAATTCTCGCCGCCGCC
CTTCTCCTCCGCCGCTCTTCATTTTTCCTACTCCGTTTGTGAACGGAGAATCGGATTTCTGTTGATCTGGGAAATGTTTCATGAAGTGGAACTAGTGAGAGATGTGGAAA
TCACGGCTGAAAAGGAAAAGAGAGATGCTCTCAACTTTCAGAGGTACATTGTAACATGTCTATTAGAGAACTTATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTT
CTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCATTACCTTTATTTGCCGAACCTTTTTGCCTCTAGAGGG
GGAGATCTTACATGGAGTTGTTCGTCACATATTTCGACGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATT
ATGTTGGTGGTGAAAATCCTGTATTCTTAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGA
TGTATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTGACTCTGATGAGTTTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
CATTTTCCAAGATCCATTTTTTGTTTCTTTAAAAATGGCAAACCCATCCGCCTTTACTTTATCCACTCCAATCACAACATCCCAACGCTTTCTAATGCCCGCCCATTTTC
CTTTCTCTAGTGCTTCGCAATTCTCGCCGCCGCCCTTCTCCTCCGCCGCTCTTCATTTTTCCTACTCCGTTTGTGAACGGAGAATCGGATTTCTGTTGATCTGGGAAATG
TTTCATGAAGTGGAACTAGTGAGAGATGTGGAAATCACGGCTGAAAAGGAAAAGAGAGATGCTCTCAACTTTCAGAGGTACATTGTAACATGTCTATTAGAGAACTTATT
GAAGGAGAAGGCCAACAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCATTA
CCTTTATTTGCCGAACCTTTTTGCCTCTAGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCGACGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTG
TTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTATTCTTAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTTCAG
TGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTGACT
CTGATGAGTTTGACTTGTAAATTTAGAATACAAACCCCAAACTTGGGAATGTTTCACTGTAATATATTCATACACGCCTTGCTTATTTCTTCCCTTCTATATATCTTTCT
GTTTGATGTTCTTGGCCATGATAATTCAAGATTCTTGTGGAATGTTAACTTGAATGTCTTGCATTAAGGAAGCCCGAGGACAGGATGGATTTAATCTTTGCAAAAACAGT
ATTGTTCAATTGAAATTATCTCACCACAAGGTTTGGATTTTTCAATTTGTATTCAAGATTTTAACAGGGTCGATGTTTGCAATGTTCTACTTCTAAAGTCAATTGTGTGA
AGGCAAAACTGAGAGAGGGAGAGAGAAGTTCTGTAGGTTGAAGATGATGGCTTATTTCCAACCACTGCTATGGATGTCTATTCCTTGCAAATTACAATCCAATTCATTTG
TTTTTGTTGTTGTTTTCATTGACTCAAATAATGATGGGTTGAACAACCTGACCAGTTGGCTAAATTTATCATATTTGCATTTCAGTCAAAATGTTTAATTATTAGTTAAA
AG
Protein sequenceShow/hide protein sequence
MANPSAFTLSTPITTSQRFLMPAHFPFSSASQFSPPPFSSAALHFSYSVCERRIGFLLIWEMFHEVELVRDVEITAEKEKRDALNFQRYIVTCLLENLLKEKANKDHGYF
LAVTSLKSIGKGVVKNESQCVSFPITFICRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFLSNEFATIGNDVVVRFSVLGVRWIEKRG
CIKKEFVMLASLEGNNSLGPISLSDSDEFDL