CuGenDBv2

Gene ID	Clc05G05900
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	rRNA-processing protein EFG1
Genome location	ClcChr05:4258524..4261637
RNA-Seq Expression	Clc05G05900
Synteny	Clc05G05900
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134104.1 rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]

1.5e-159

97.31

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA +KAGSS+RKSSTNHRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_011650949.1 rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]

5.5e-157

96.71

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQA +KAGSS+RKSSTNHRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_016899108.1 PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]

4.2e-157

97.01

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]

4.8e-161

97.6

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQLQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NHQRQISAR LMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]

1.7e-158

97.01

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQLQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NH  QISAR LMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7B4 rRNA-processing protein EFG1

7.5e-160

97.31

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA +KAGSS+RKSSTNHRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A1S4DT25 rRNA-processing protein EFG1

2.0e-157

97.01

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A6J1G412 rRNA-processing protein EFG1

1.6e-149

93.39

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQ QISARALMPPPRPTKSF SSAQARSK GSSLRK STN RAE S+SSNTS SRSG SFKARG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G415 rRNA-processing protein EFG1

4.1e-150

93.41

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKAR
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQARSK GSSLRK STN RAE S+SSNTS SRSG SFKAR
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKAR

Query:  GSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        GSSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  GSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G428 rRNA-processing protein EFG1

5.9e-149

93.09

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NH  QISARALMPPPRPTKSF SSAQARSK GSSLRK STN RAE S+SSNTS SRSG SFKARG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hits

e value

%identity

Alignment

A3LNR4 rRNA-processing protein EFG1

1.6e-05

30.46

Show/hide

Query:  GKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
        GKRR N A+    G+      +   LK +IR  ER+L+K+ LPA+VR   E+ ++ L+ + +        +++  +   ++FFE++K  R++++  K   
Subjt:  GKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR

Query:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD
          S      DI     ++K    DL YV  FPK+EKY++L+    ++D VD
Subjt:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD

A8N5J5 rRNA-processing protein EFG1

1.4e-06

30.51

Show/hide

Query:  PKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKLKE
        P    +K+ +R   R+L K NL A+ R   E++L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G  +   +  QL + + 
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKLKE

Query:  DLEYVRFFPKTEKYVALF
        +L Y+  +PKT+KY++LF
Subjt:  DLEYVRFFPKTEKYVALF

P0CN34 rRNA-processing protein EFG1

9.2e-06

31.61

Show/hide

Query:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ
        PA     G  +   P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +  
Subjt:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ

Query:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
         + S   ++L   +  L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

P0CN35 rRNA-processing protein EFG1

9.2e-06

31.61

Show/hide

Query:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ
        PA     G  +   P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +  
Subjt:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ

Query:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
         + S   ++L   +  L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

Q09867 rRNA-processing protein efg1

1.1e-09

35.29

Show/hide

Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK
        K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL
         + DL Y++ +P   KYV+L+         + R ++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

1.5e-99

65.78

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Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVREA EKKL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD
        R IRRLEKL R+ S G +QD++I  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASGK+LEETGSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD

Query:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG
        FF+ GSSSDEADADDEWTDKST+E  SS SG+A S MSSDE+N Q+  S R LMPPP            RS+  S+ R+ S+  R E  +SSNTS  RS 
Subjt:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSG

Query:  SFKARGSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        S  +  +++SHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SFKARGSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)

8.6e-100

66.96

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Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVRE+  +KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF
        R IRRLEKLQR  S  + D DIA+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF

Query:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSS--NTSGSRS
        F  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDE+N Q+Q S RALMPPP          QAR ++ S  RK+    R E  +SS  NTS  RS
Subjt:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSS--NTSGSRS

Query:  -GSFKARGS-SNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
          S+ AR S +NS++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  -GSFKARGS-SNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCAGCCCGCCGATCGAAGGGTTTGGCGGTTGAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAA
ATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCT
CGTTTGGCTGTTGAGCGGAAAATATTCTTGCGCGATAGGAAGATAAAATTTTTTGAGAGGAGGAAAATTGAAAGAAGAATTAGACGACTTGAAAAACTGCAACGT
GCTCCATCTGGCCAGTTGCAAGATTCAGATATCGCAGATCAATTGTCCAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTA
GCTTTATTTACTGGAAGTGATGATTCAGACATGGTTGATAGGAGGAAAAAGTTGCGTGAGCAGATTAAAGCCAATCTGATTGCTGCGGCAGCCAGTGGAAAGGAT
TTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGTGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGG
ACAGATAAAAGTACAAGGGAACAGGCTTCCAGTACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATCTCTGCCAGAGCC
TTGATGCCACCTCCTCGTCCAACCAAATCATTTTCAAGTTCAGCTCAAGCTCGGTCAAAAGCTGGATCTTCGTTGAGAAAATCTTCTACAAATCACAGGGCTGAG
TTTTCTACATCCAGCAATACATCGGGTAGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCT
GATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAGCAGGTATGCCACTTGTACGAAAACTTCACTCCTTCACACTAG

mRNA sequence

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TCAGAAAAAGGCGCTAAATAGGGATTTGCATAAATTAAGAAGATCGTCTGGAAAATCCAAAAAGTTAAAAAGGAAAGAAAGTAAAATGTTGGGAGGTTGAAAGAA
AGAAAGAAACGTATCCCCTCTCCGCCTCCGGTGTTCTGAATACACCGGTGTGGTGCTGAGAGCTTCTTCACTAAACTCTTCCTGCAAACCCACCTTCCTTCCTCT
TCCTCTTCCTCGTCCTCTTCTCTCTCATCTACGTCCATGGCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCAGCCCGCCGATCGAAGGGTTTGGCGGTT
GAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGAGGCTCAAGAAAAGAAG
TTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGTTTGGCTGTTGAGCGGAAAATATTCTTGCGCGATAGGAAGATAAAATTTTTTGAGAGGAGGAAAATT
GAAAGAAGAATTAGACGACTTGAAAAACTGCAACGTGCTCCATCTGGCCAGTTGCAAGATTCAGATATCGCAGATCAATTGTCCAAGTTGAAAGAGGATCTTGAA
TATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACTGGAAGTGATGATTCAGACATGGTTGATAGGAGGAAAAAGTTGCGTGAGCAGATTAAA
GCCAATCTGATTGCTGCGGCAGCCAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGTGAGGATGATTTCTTCTTATGTGGC
AGCTCAAGTGATGAAGCAGATGCAGATGATGAATGGACAGATAAAAGTACAAGGGAACAGGCTTCCAGTACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGAT
GAAAAAAATCATCAGAGGCAGATCTCTGCCAGAGCCTTGATGCCACCTCCTCGTCCAACCAAATCATTTTCAAGTTCAGCTCAAGCTCGGTCAAAAGCTGGATCT
TCGTTGAGAAAATCTTCTACAAATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCGGGTAGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCG
CATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAGCAGGTATGCCACTTGTACGAA
AACTTCACTCCTTCACACTAG

Protein sequence

Show/hide protein sequence

MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
APSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEW
TDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSFKARGSSNSHTGQSSNISSNS
DAHKPRRKRRPKKKKQQVCHLYENFTPSH

Clc05G05900 (gene) of Watermelon (cordophanus) v2 genome