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Clc05G05940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G05940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCIPKT
Genome locationClcChr05:4291672..4292890
RNA-Seq ExpressionClc05G05940
SyntenyClc05G05940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9K182 Uncharacterized protein3.2e-1261.33Show/hide
Query:  TNKITPQDQASAFPPSYPPPPRRIMTSGAEYAGVPQAVWSNPSLSC-SGKAERPKSEIFRLPCSSSKRFCGFTSR
        TN+ITPQDQ S F PSY   P R++TSGA YAGVP  V   PS    S +A  PKSEIFRLP SS+ RF GF SR
Subjt:  TNKITPQDQASAFPPSYPPPPRRIMTSGAEYAGVPQAVWSNPSLSC-SGKAERPKSEIFRLPCSSSKRFCGFTSR
A0A0A9KAC9 CIPKT7.3e-0950.57Show/hide
Query:  RLLSSKGRYPESNTNKITPQDQASAFPPSYPPPPRRIMTSGAEYAGVPQAVWSNPSLSCSGKAERPKSEIFRLPCSSSKRFCGFTSR
        RL S KGRYP ++TN  TPQDQ S    SY    R    SGA YAGVPQ VW       S  A  PKS  F+ P SS +RF G  SR
Subjt:  RLLSSKGRYPESNTNKITPQDQASAFPPSYPPPPRRIMTSGAEYAGVPQAVWSNPSLSCSGKAERPKSEIFRLPCSSSKRFCGFTSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGTACATCCCCGCTAGGTTGCTGTCGTCGAAAGGGAGATACCCAGAGAGCAATACGAATAAAATCACTCCACAAGACCAGGCGTCGGCCTTTCCACCGTCGTA
TCCGCCGCCACCGCGCCGGATCATGACCTCCGGCGCTGAGTACGCTGGAGTTCCACAAGCCGTGTGGAGCAACCCGTCTCTGAGCTGTTCGGGTAAAGCAGAGAGGCCGA
AATCGGAGATTTTCAGATTGCCCTGTTCGTCCAGCAAAAGATTCTGCGGCTTCACATCGCGGTGA
mRNA sequenceShow/hide mRNA sequence
CCCGCCTCCACCTTGTACCCCAACTCTCCGCCCATCTCCTTCACCCTCTCCTCCACCTCCATCACCGTCGCCCTCGACGTAAACCTCCTCTCCGCCCTTTTCTCCGCCGT
TTCAAACAGCCCCGATAAATCCAACCCCGACGACATCGAAATTATATCGAACGCATTCATTTCCCTAATTCCCCTCTCTGTCCCCGATCGATAATCCCTCATCGGTTGCA
ATAAACTTTCATTACTCTGTTTCAATTGCAGCGATTTCTTGAACCAGGGGTTTTGCATTAACGTCTCAATGCTCATTCTCGTTTTGGGATTCGGATCGAGGAGATGATAT
ATTAGGAATCGGACCGGTTTCGATATCCAATTAGGGATTTGAAATTCTCGCCGGTGGATGTTCTTGTACATCCCCGCTAGGTTGCTGTCGTCGAAAGGGAGATACCCAGA
GAGCAATACGAATAAAATCACTCCACAAGACCAGGCGTCGGCCTTTCCACCGTCGTATCCGCCGCCACCGCGCCGGATCATGACCTCCGGCGCTGAGTACGCTGGAGTTC
CACAAGCCGTGTGGAGCAACCCGTCTCTGAGCTGTTCGGGTAAAGCAGAGAGGCCGAAATCGGAGATTTTCAGATTGCCCTGTTCGTCCAGCAAAAGATTCTGCGGCTTC
ACATCGCGGTGAACGACGCCGTTTTCGTGGCAGAACTTGAGGGCTGAGACGAGTTGTTGGAAGTACCGGCGGGCGACGGGTTCGGTGAATCGCCCGCGGCGGGAGATTTT
GGCGAAGAGTTCGCCTCCGGCGGCGAATTCGACCACCAGGTAGATTTTGGACTTGGTCGCCATGACTTCGTGGATTTTGAGGATGTTTGGGTGGTGATCGAGGCGGCGCA
TGGCGGCGACCTCTCGGACTATGCAATGTTCAAGAGCGGCGCCGACCGTTTTGGATTTGTCGATGATTTTGATGGCAACGGTGGAGTTATCGGCTAAGGAAACTGCTTGG
TAGACTTTGGCGAAGCTTCCGCGACCGAGAAGGCGGCCTAATTGGTACTTTCCGAGAAGGGTGGCGCCGGTGGAAGGTGGAGCTGCGGCGAGCGTTGGCCGGAGCCCCGT
CTCCATAGCGGCGACGGTGGCGGCGCTGAAAGTGCCTTGGAAGTGAAGCGTACTATAGTTGCAATGGAGGCATTGGAAAATTAGGTTTTTATAATGTGTTCCCAATGGAT
GCATGGGAT
Protein sequenceShow/hide protein sequence
MFLYIPARLLSSKGRYPESNTNKITPQDQASAFPPSYPPPPRRIMTSGAEYAGVPQAVWSNPSLSCSGKAERPKSEIFRLPCSSSKRFCGFTSR