; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G06060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G06060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmeiotic recombination protein DMC1 homolog
Genome locationClcChr05:4442298..4448213
RNA-Seq ExpressionClc05G06060
SyntenyClc05G06060
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0007131 - reciprocal meiotic recombination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000150 - recombinase activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR010995 - DNA repair Rad51/transcription factor NusA, alpha-helical
IPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR020587 - DNA recombination and repair protein RecA, monomer-monomer interface
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR033925 - Rad51/DMC1/RadA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049326.1 meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]1.3e-13281.01Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R---------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR
        +                                                   LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR
Subjt:  R---------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR

Query:  AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
        AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Subjt:  AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH

Query:  AATVRLMFRKGKDNTR
        AATVRLMFRKGK   R
Subjt:  AATVRLMFRKGKDNTR

TYK17232.1 meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]1.0e-13281.27Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

XP_004134116.1 meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus]4.6e-13381.59Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

XP_008438613.1 PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis melo]1.0e-13281.27Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

XP_031739053.1 meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]4.6e-13381.59Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

TrEMBL top hitse value%identityAlignment
A0A0A0L5D5 Uncharacterized protein5.3e-13570.57Show/hide
Query:  SKRIISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD
        S  ++ L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD
Subjt:  SKRIISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD

Query:  ALLR--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIY
        ALL+                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIY
Subjt:  ALLR--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIY

Query:  ARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL
        ARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL
Subjt:  ARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL

Query:  AHAATVRLMFRKGK---------------------------------------------------DNTRGHCRCKGLRSRKMEE
        AHAATVRLMFRKGK                                                   DNTRGHCRC+GLRS  + E
Subjt:  AHAATVRLMFRKGK---------------------------------------------------DNTRGHCRCKGLRSRKMEE

A0A1S3AXH2 meiotic recombination protein DMC1 homolog4.9e-13381.27Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

A0A5A7U4Y6 Meiotic recombination protein DMC1-like protein6.5e-13381.01Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R---------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR
        +                                                   LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR
Subjt:  R---------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR

Query:  AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
        AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Subjt:  AYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH

Query:  AATVRLMFRKGKDNTR
        AATVRLMFRKGK   R
Subjt:  AATVRLMFRKGKDNTR

A0A5D3D096 Meiotic recombination protein DMC1-like protein4.9e-13381.27Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

A0A6J1CCE5 LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog8.4e-13381.27Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPT MRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTR
        ATVRLMFRKGK   R
Subjt:  ATVRLMFRKGKDNTR

SwissProt top hitse value%identityAlignment
P37384 Meiotic recombination protein DMC1 homolog6.2e-11772.49Show/hide
Query:  EQSQQLQLVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-----
        E   QLQL++R++  E+E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTKK+LTGIKGLSEAKVDKICEAAEKLVN GYITGSD LL+     
Subjt:  EQSQQLQLVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-----

Query:  ---------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQ
                                                     LP SM GGNGKVAYIDTEGTFRPDRIVPIAERFGMD  AVLDNIIYARAYTYEHQ
Subjt:  ---------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQ

Query:  HNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM
        +NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATVRLM
Subjt:  HNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM

Query:  FRKGKDNTR
         RKGK   R
Subjt:  FRKGKDNTR

Q39009 Meiotic recombination protein DMC1 homolog6.4e-12272.84Show/hide
Query:  SLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-
        SL AEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++ 
Subjt:  SLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-

Query:  -------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT
                                                         LPT+M+GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT
Subjt:  -------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT

Query:  YEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
        YEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Subjt:  YEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT

Query:  VRLMFRKGKDNTR
        +RL+FRKGK +TR
Subjt:  VRLMFRKGKDNTR

Q7EAG4 Meiotic recombination protein DMC1 homolog B4.2e-11364.52Show/hide
Query:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------
        ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD L++      
Subjt:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------

Query:  --------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH
                                                    LP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD  AVLDNIIYARAYTYEHQ+
Subjt:  --------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH

Query:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF
        NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Subjt:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF

Query:  RKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD
        RKGK   R    CK   +  + E   +F    Q T G  +D
Subjt:  RKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD

Q7GBF7 Meiotic recombination protein DMC1 homolog B4.2e-11364.52Show/hide
Query:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------
        ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD L++      
Subjt:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------

Query:  --------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH
                                                    LP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD  AVLDNIIYARAYTYEHQ+
Subjt:  --------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH

Query:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF
        NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Subjt:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF

Query:  RKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD
        RKGK   R    CK   +  + E   +F    Q T G  +D
Subjt:  RKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD

Q96449 Meiotic recombination protein DMC1 homolog1.9e-12670.4Show/hide
Query:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
        + +L +EE S QLQLVEREDI+D++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLMMHTKK+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL
Subjt:  IISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL

Query:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
        +                                                  LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA
Subjt:  R--------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARA

Query:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
        YTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+GRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV++DPGGGVFV+DPKKPAGGHVLAHA
Subjt:  YTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA

Query:  ATVRLMFRKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD
        ATVRLMFRKGK   R    CK   +  + E   +F    Q T G   D
Subjt:  ATVRLMFRKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVD

Arabidopsis top hitse value%identityAlignment
AT2G45280.1 RAS associated with diabetes protein 51C2.3e-1333.33Show/hide
Query:  LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVD
        +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVD
Subjt:  LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVD

Query:  SIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF
        SI   FR D+    +LA+R + L++M  +  K+A++F++AV + NQV      G F
Subjt:  SIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF

AT2G45280.2 RAS associated with diabetes protein 51C2.3e-1333.33Show/hide
Query:  LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVD
        +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVD
Subjt:  LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVD

Query:  SIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF
        SI   FR D+    +LA+R + L++M  +  K+A++F++AV + NQV      G F
Subjt:  SIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF

AT3G22880.1 DNA repair (Rad51) family protein4.6e-12372.84Show/hide
Query:  SLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-
        SL AEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++ 
Subjt:  SLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-

Query:  -------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT
                                                         LPT+M+GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT
Subjt:  -------------------------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYT

Query:  YEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
        YEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Subjt:  YEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT

Query:  VRLMFRKGKDNTR
        +RL+FRKGK +TR
Subjt:  VRLMFRKGKDNTR

AT5G20850.1 RAS associated with diabetes protein 513.1e-5541.75Show/hide
Query:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGS-----------
        EQ +    V+++D E+       +++L + GI + DVKKL+DAG+ T  G+    +K L  IKG+S+AKVDKI EAA KLV  G+ + S           
Subjt:  EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGS-----------

Query:  --------DALL-------------------------------RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH
                D +L                               +LP    GG GK  YID EGTFRP R++ IA+RFG++   VL+N+ YARAY  +HQ 
Subjt:  --------DALL-------------------------------RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQH

Query:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVRLM
         LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ RQ  LA+ L  L K+A+EF VAV +TNQVVA   G    + P+ KP GG+++AHA T RL 
Subjt:  NLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVRLM

Query:  FRKGKDNTR
         RKG+   R
Subjt:  FRKGKDNTR

AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3)7.1e-0723.91Show/hide
Query:  RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYTYEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDF
        +LP S  G NG   Y+ +E  F   R+  ++  F     ++         D++     ++ +H  +++  +   +       P KL+++DS+ ALFR +F
Subjt:  RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYTYEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDF

Query:  TGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQV
             +L +R     ++  +L ++A +F++A+ +TNQV
Subjt:  TGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCATGTCAAAACGCATAATTTCACTGCCAGCGGAAGAACAAAGCCAACAGCTACAGCTTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGC
GATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGA
CCGGGATAAAAGGCTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAGGCTTCCG
ACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTTCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGC
TGTCCTTGACAATATCATATATGCTCGTGCCTACACATACGAACACCAGCATAACCTTTTGCTCGGTCTTGCTGCAAAAATGTCTGAAGAACCATTTAAGCTTCTGATTG
TCGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGAGCGCCAGCAAAAACTGGCGCAGATGTTGTCCCGATTAACTAAAATTGCAGAA
GAGTTTAATGTAGCAGTTTACATGACCAACCAAGTTGTTGCAGACCCAGGTGGAGGAGTTTTTGTATCAGATCCCAAAAAACCCGCAGGAGGCCACGTTCTTGCCCATGC
TGCTACAGTTAGATTGATGTTCAGAAAAGGCAAAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGAGGTCTCGTAAGATGGAGGAGAGGGTTTTGCTTTTCGACG
GAATAGGCCAAGAGACCGGCGGAGCCGAGGTTGACGATGACAGAACCAGGGTAGACGGAGCTAAAATGGTGGGCCAGAATTCCATCTTTCAGAGCGTAAACGGAATCGGA
CTCAGGGCTCTGCAGAGCGTCGGGACTTTTGGCCACCGATTTGTCGAAGACGGCGAGCATTTTGTAGATCGTCGATCGGAAAATGAGAGAACTAAAAACACGGTTGGTTT
CGTATCTGAATGCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCATGTCAAAACGCATAATTTCACTGCCAGCGGAAGAACAAAGCCAACAGCTACAGCTTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGC
GATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGA
CCGGGATAAAAGGCTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAGGCTTCCG
ACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTTCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGC
TGTCCTTGACAATATCATATATGCTCGTGCCTACACATACGAACACCAGCATAACCTTTTGCTCGGTCTTGCTGCAAAAATGTCTGAAGAACCATTTAAGCTTCTGATTG
TCGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGAGCGCCAGCAAAAACTGGCGCAGATGTTGTCCCGATTAACTAAAATTGCAGAA
GAGTTTAATGTAGCAGTTTACATGACCAACCAAGTTGTTGCAGACCCAGGTGGAGGAGTTTTTGTATCAGATCCCAAAAAACCCGCAGGAGGCCACGTTCTTGCCCATGC
TGCTACAGTTAGATTGATGTTCAGAAAAGGCAAAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGAGGTCTCGTAAGATGGAGGAGAGGGTTTTGCTTTTCGACG
GAATAGGCCAAGAGACCGGCGGAGCCGAGGTTGACGATGACAGAACCAGGGTAGACGGAGCTAAAATGGTGGGCCAGAATTCCATCTTTCAGAGCGTAAACGGAATCGGA
CTCAGGGCTCTGCAGAGCGTCGGGACTTTTGGCCACCGATTTGTCGAAGACGGCGAGCATTTTGTAGATCGTCGATCGGAAAATGAGAGAACTAAAAACACGGTTGGTTT
CGTATCTGAATGCAAATAGAGTACGGGTGATGAAAGATCGCTTGCGGTTGGAGGACGAGGACCTGGAGTTTGGAGATACTTGAAAATTAAAATATAGACAATATATATAA
ATAAAT
Protein sequenceShow/hide protein sequence
MEAMSKRIISLPAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRLP
TSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAE
EFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVDDDRTRVDGAKMVGQNSIFQSVNGIG
LRALQSVGTFGHRFVEDGEHFVDRRSENERTKNTVGFVSECK