; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G06540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G06540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhotosystem I reaction center subunit II, chloroplastic
Genome locationClcChr05:4809080..4809991
RNA-Seq ExpressionClc05G06540
SyntenyClc05G06540
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003685 - Photosystem I PsaD
IPR036579 - Photosystem I, reaction centre subunit PsaD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018694.1 Photosystem I reaction center subunit II, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-10192.86Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKS A+T+PWKQS TLSF+NSKPL KPA+SSR +KVSAEAEA AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

XP_022955930.1 photosystem I reaction center subunit II, chloroplastic [Cucurbita moschata]1.5e-10192.86Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKSTA+T+PWKQS TLSF+NSKPL KPA+SSR +KVSAEAE  AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

XP_022973649.1 photosystem I reaction center subunit II, chloroplastic-like [Cucurbita maxima]1.5e-10193.3Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYV
        MAMAAQATLFTPSL++PKSTA  VPWKQSPTLSFLN+KPL  ASSSR +KVSAEAEA AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFYV
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYV

Query:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK
        ITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK
Subjt:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK

Query:  FTGKQVYDL
        FTGKQVYDL
Subjt:  FTGKQVYDL

XP_023528925.1 photosystem I reaction center subunit II, chloroplastic [Cucurbita pepo subsp. pepo]5.2e-10293.33Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKSTA+T+PWKQS TLSF+NSKPL KPA+SSR +KVSAEAEA AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

XP_038876164.1 photosystem I reaction center subunit II, chloroplastic [Benincasa hispida]2.5e-10496.19Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKSTAITVPWKQSPTLSF+NSKP LKPASSSRSLKVSAEAE   A VEAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

TrEMBL top hitse value%identityAlignment
A0A1S3AXN9 photosystem I reaction center subunit II, chloroplastic2.1e-10193.33Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMA QATLFTPSLS+PKS+AI++PWKQSPTLSFL SKP LK ASSSRSLKVSAEAE   A VEAPAGF+PPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

A0A5D3D399 Photosystem I reaction center subunit II2.1e-10193.33Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMA QATLFTPSLS+PKS+AI++PWKQSPTLSFL SKP LK ASSSRSLKVSAEAE   A VEAPAGF+PPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

A0A6J1GWF9 photosystem I reaction center subunit II, chloroplastic7.4e-10292.86Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKSTA+T+PWKQS TLSF+NSKPL KPA+SSR +KVSAEAE  AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

A0A6J1ICA2 photosystem I reaction center subunit II, chloroplastic-like7.4e-10293.3Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYV
        MAMAAQATLFTPSL++PKSTA  VPWKQSPTLSFLN+KPL  ASSSR +KVSAEAEA AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFYV
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYV

Query:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK
        ITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK
Subjt:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVK

Query:  FTGKQVYDL
        FTGKQVYDL
Subjt:  FTGKQVYDL

A0A6J1INM6 photosystem I reaction center subunit II, chloroplastic2.8e-10192.38Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMAAQATLFTPSLS+PKSTA+T+PWKQS TL F+NSKPL KPA+SSR +KVSAEAE  AA  EAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPL-KPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

SwissProt top hitse value%identityAlignment
P12353 Photosystem I reaction center subunit II, chloroplastic1.0e-8478.24Show/hide
Query:  MAMAAQATLFTP-SLSS--PKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPV----EAPAGFSPPELDPTTPSPIFAGSTGGLLRKA
        MAMA QATLF+P SLSS  P  T +T  +KQ   ++F +    KPAS   S++ +A AE +AA      EAP GF+PPELDP TPSPIFAGSTGGLLRKA
Subjt:  MAMAAQATLFTP-SLSS--PKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPV----EAPAGFSPPELDPTTPSPIFAGSTGGLLRKA

Query:  QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKN
        QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR+GVG N RSIGKN
Subjt:  QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKN

Query:  VSPIEVKFTGKQVYDL
        VSPIEVKFTGKQ YDL
Subjt:  VSPIEVKFTGKQVYDL

P12372 Photosystem I reaction center subunit II, chloroplastic2.5e-8681.6Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLK-PASSSRSLKVSAEAEAQAAPVE--APAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEE
        MAMA QA+LFTP LS PKST  T PWKQS  +SF   K LK   S +R ++  AE EA AA  E  APAGF+PP+LDP TPSPIF GSTGGLLRKAQVEE
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLK-PASSSRSLKVSAEAEAQAAPVE--APAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEE

Query:  FYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPI
        FYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKN S I
Subjt:  FYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPI

Query:  EVKFTGKQVYDL
        EVKFTGKQVYD+
Subjt:  EVKFTGKQVYDL

P29302 Photosystem I reaction center subunit II, chloroplastic7.9e-8579.52Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLK-PASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMA QA+LFTP+LS+PKS+A   PWKQS  L+  + K LK   S+ R ++  AE EA     EAP GF+PP+LDP TPSPIF GSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLK-PASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMREG NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQNFRSIGKN SPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

P32869 Photosystem I reaction center subunit II, chloroplastic8.4e-10392.38Show/hide
Query:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MAMA QATLFTPSLS+PKST I++PWKQS TLSFL SKP LK ASSSRS KVSAEAE     VEAPAGFSPPELDP+TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKP-LKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQVYDL
Subjt:  KFTGKQVYDL

Q9S7H1 Photosystem I reaction center subunit II-1, chloroplastic6.1e-7787.27Show/hide
Query:  RSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR
        R+ K  + A A AAP   EAP GF+PP+LDP TPSPIFAGSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR
Subjt:  RSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR

Query:  SKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL
        SKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG N RSIGKNVSPIEVKFTGKQ YDL
Subjt:  SKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL

Arabidopsis top hitse value%identityAlignment
AT1G03130.1 photosystem I subunit D-24.0e-7670.95Show/hide
Query:  MAAQAT-LFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY
        MA QA  +F+P++++  S        +   L   + +P   + +  +++      + AAP   EAP GF+PP+LDP TPSPIFAGSTGGLLRKAQVEEFY
Subjt:  MAAQAT-LFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV
        VITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG N RSIGKNVSPIEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEV

Query:  KFTGKQVYDL
        KFTGKQ YDL
Subjt:  KFTGKQVYDL

AT4G02770.1 photosystem I subunit D-14.3e-7887.27Show/hide
Query:  RSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR
        R+ K  + A A AAP   EAP GF+PP+LDP TPSPIFAGSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR
Subjt:  RSLKVSAEAEAQAAPV--EAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR

Query:  SKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL
        SKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG N RSIGKNVSPIEVKFTGKQ YDL
Subjt:  SKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCAGCTCAAGCAACCCTCTTCACCCCATCTCTCTCCAGCCCCAAATCCACCGCCATTACCGTCCCATGGAAGCAATCCCCAACTCTCTCCTTCCTCAACTC
CAAGCCCCTCAAGCCCGCCTCCTCTTCCCGCTCACTCAAGGTCTCTGCCGAAGCCGAAGCCCAGGCGGCCCCGGTCGAGGCTCCTGCCGGATTCTCCCCACCAGAGCTCG
ACCCAACCACCCCTTCCCCAATCTTCGCCGGCAGTACCGGGGGACTGCTCCGGAAGGCCCAGGTGGAGGAATTCTATGTCATAACATGGGAGTCCCCCAAGGAGCAAATA
TTCGAGATGCCGACCGGTGGCGCGGCGATTATGCGAGAAGGGCCGAATCTGCTGAAATTGGCTAGGAAAGAGCAGTGTTTGGCTTTGGGGACAAGGCTGAGATCTAAGTA
CAAGATTAAGTATCAATTTTATAGGGTTTTTCCTAATGGGGAAGTTCAATATTTGCATCCTAAAGATGGGGTTTATCCAGAGAAGGTGAATCCAGGAAGGGAAGGAGTTG
GTCAGAATTTCAGGTCTATTGGGAAGAATGTCAGCCCCATTGAAGTCAAGTTCACTGGAAAACAAGTGTATGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
CACACATTTATTGAGAAAAAAAAAAATAGAGTTGGGAATAAATTGAGGATGAAATAAAAGGGTGTGGGTGAGGAATGCATATCAAAAACACTGATTCTAATTGGCCAACC
AAAGATCATCTTATCCACTCCCCAAATTCCCATCACCCACACAAAATCAAAAACCCCAAATTCAAATCTTCTTATTCTTCCTTCATCCTCCATTCCCAACCCACCATTTC
CAATCCTCTTCCTCTGCTTCAATCCCATGGCCATGGCAGCTCAAGCAACCCTCTTCACCCCATCTCTCTCCAGCCCCAAATCCACCGCCATTACCGTCCCATGGAAGCAA
TCCCCAACTCTCTCCTTCCTCAACTCCAAGCCCCTCAAGCCCGCCTCCTCTTCCCGCTCACTCAAGGTCTCTGCCGAAGCCGAAGCCCAGGCGGCCCCGGTCGAGGCTCC
TGCCGGATTCTCCCCACCAGAGCTCGACCCAACCACCCCTTCCCCAATCTTCGCCGGCAGTACCGGGGGACTGCTCCGGAAGGCCCAGGTGGAGGAATTCTATGTCATAA
CATGGGAGTCCCCCAAGGAGCAAATATTCGAGATGCCGACCGGTGGCGCGGCGATTATGCGAGAAGGGCCGAATCTGCTGAAATTGGCTAGGAAAGAGCAGTGTTTGGCT
TTGGGGACAAGGCTGAGATCTAAGTACAAGATTAAGTATCAATTTTATAGGGTTTTTCCTAATGGGGAAGTTCAATATTTGCATCCTAAAGATGGGGTTTATCCAGAGAA
GGTGAATCCAGGAAGGGAAGGAGTTGGTCAGAATTTCAGGTCTATTGGGAAGAATGTCAGCCCCATTGAAGTCAAGTTCACTGGAAAACAAGTGTATGATTTGTAAGAAA
TTTCCTGTGTTCTAATGCTTCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAMAAQATLFTPSLSSPKSTAITVPWKQSPTLSFLNSKPLKPASSSRSLKVSAEAEAQAAPVEAPAGFSPPELDPTTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQI
FEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL