CuGenDBv2

Gene ID	Clc05G07330
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	BHLH domain-containing protein
Genome location	ClcChr05:5474048..5474768
RNA-Seq Expression	Clc05G07330
Synteny	Clc05G07330
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134190.1 transcription factor bHLH95 [Cucumis sativus]

1.8e-78

82.93

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEAC+DSV+PLFPLILPVHH   EATEK+ASASRKR RA+EANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  I FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SV +L + NSDSS GG  G GVIVS+SGN VLFG+IIA+VQRG+VTQIL+VFERH+ EVLAANV VSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        L LKK
Subjt:  LSLKK

XP_016898986.1 PREDICTED: transcription factor bHLH95-like [Cucumis melo]

2.9e-81

84.88

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEAC+DSVVPLFPLILP+HH   EATEK+ASASRKR RA+EANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  I FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SVT+L ++NSDSS  GG G GVIVS+SGN VLFG+IIA+VQRGMVTQIL+VFERH+TEVLAANV VSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]

8.0e-79

84.88

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEACTDSVV L P ILPV  HQSEA E KAS SRKR RA+EANGG Q+KGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETI FIE LQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKK  +SVTML S NSDS GG GG GGVIVSVS N VLFGII A+V+RGMVT+ILM FERHQ EVLAANVAVSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

XP_023528352.1 uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]

1.2e-77

84.39

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEACTDSVV L P ILPV  HQSEA E KAS SRKR RA+EANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETI FIE LQKQL RLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKK  +SVTML S NSDS   GGG GGVIVSVS N VLFGII A+V+RGMVTQILM FERHQ EVLAANVAVSHGNLTLTVTAS+HG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]

1.8e-86

91.71

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEACTDSVVPLFPLILPV  HQSEATEKKASASRKR RA+EANGGVQKK REKRKEMSESFDVLQSLVPNLSPKATRETIVSETI FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SVTML S NSDSS  GGGGGGVIVSVSGN VLFGIIIA+VQRGMVTQILMVFERHQ EVLAANVAVSHGNLTLTVTASVHG+VENTIE I+NDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5R7 BHLH domain-containing protein

8.6e-79

82.93

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEAC+DSV+PLFPLILPVHH   EATEK+ASASRKR RA+EANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  I FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SV +L + NSDSS GG  G GVIVS+SGN VLFG+IIA+VQRG+VTQIL+VFERH+ EVLAANV VSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        L LKK
Subjt:  LSLKK

A0A1S4DSM0 transcription factor bHLH95-like

1.4e-81

84.88

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEAC+DSVVPLFPLILP+HH   EATEK+ASASRKR RA+EANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  I FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SVT+L ++NSDSS  GG G GVIVS+SGN VLFG+IIA+VQRGMVTQIL+VFERH+TEVLAANV VSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

A0A5A7U767 Transcription factor bHLH95-like

1.4e-81

84.88

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEAC+DSVVPLFPLILP+HH   EATEK+ASASRKR RA+EANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  I FIEFLQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKKSS+SVT+L ++NSDSS  GG G GVIVS+SGN VLFG+IIA+VQRGMVTQIL+VFERH+TEVLAANV VSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

A0A6J1GWN9 uncharacterized protein LOC111457820

1.2e-77

84.39

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEACTDSVV L P ILPV  HQSEA E KAS SRKR RA+EANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETI FIE LQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKK  +SVTML S NSDS      GGGVIVSVS N VLFGII A+V+RGMVTQILM FERHQ EVLAANVAVSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

A0A6J1IS55 uncharacterized protein LOC111479473

3.9e-79

84.88

Show/hide

Query:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM
        MEACTDSVV L P ILPV  HQSEA E KAS SRKR RA+EANGG Q+KGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETI FIE LQKQLMRLEM
Subjt:  MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEM

Query:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI
        EKK  +SVTML S NSDS GG GG GGVIVSVS N VLFGII A+V+RGMVT+ILM FERHQ EVLAANVAVSHGNLTLTVTASVHG+VENTIEQIRNDI
Subjt:  EKKSSKSVTMLSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDI

Query:  LSLKK
        LSLKK
Subjt:  LSLKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCTGCACCGACTCTGTGGTTCCACTTTTTCCCCTCATTTTGCCGGTTCATCACCATCAATCTGAAGCCACTGAAAAGAAGGCTTCGGCCTCAAGAAAGCGTAG
CAGAGCTATGGAAGCAAACGGCGGTGTACAGAAGAAAGGGAGGGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTTGTCCCAAATCTCTCTCCCA
AGGCTACGAGAGAGACTATTGTTTCCGAAACGATCCACTTCATCGAGTTTCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAGTCGTCGAAATCGGTGACGATG
CTTTCGAGTGCGAATTCGGATTCATCAGGCGGCGGCGGCGGCGGCGGCGGCGTCATTGTCTCGGTCTCCGGCAACACTGTGTTGTTTGGGATTATTATTGCTGCTGTTCA
ACGAGGTATGGTGACACAGATTTTAATGGTGTTTGAAAGACACCAGACTGAAGTTCTTGCAGCGAATGTTGCAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCGT
CTGTACACGGTTTCGTAGAGAATACCATAGAGCAGATTAGAAACGACATCCTAAGCTTAAAGAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEACTDSVVPLFPLILPVHHHQSEATEKKASASRKRSRAMEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIHFIEFLQKQLMRLEMEKKSSKSVTM
LSSANSDSSGGGGGGGGVIVSVSGNTVLFGIIIAAVQRGMVTQILMVFERHQTEVLAANVAVSHGNLTLTVTASVHGFVENTIEQIRNDILSLKK

Clc05G07330 (gene) of Watermelon (cordophanus) v2 genome