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Clc05G07890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G07890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:5935741..5939291
RNA-Seq ExpressionClc05G07890
SyntenyClc05G07890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049516.1 hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa]1.8e-2775Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        AR DL RIG+E FA+IEEHYDRPRRRP+   P  PQPV  +QPP+RMVE SPPIRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0745.45Show/hide
Query:  MAARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQ-PVAVVQPPQRMVEPSP-PIRCDQLAKAHGGMIIKDW
        MA R DL +IG EGF +I+E++ R    RRP    P  PQ P    QPP++M E  P P+ C+Q+A+A GG++I  W
Subjt:  MAARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQ-PVAVVQPPQRMVEPSP-PIRCDQLAKAHGGMIIKDW
KGN57134.1 hypothetical protein Csa_010351 [Cucumis sativus]5.4e-1158.21Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGG
        +R DL +IGLEGFA+IEE Y +  P+RRP+  A   PQ +  + PPQRM E SPPIRC+QLAK H G
Subjt:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGG
KGN57135.1 hypothetical protein Csa_010300 [Cucumis sativus]2.5e-2472.29Show/hide
Query:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        MAAR  DL RIGLEGF  IEE YDRPRR+P+  AP  PQPV  + PPQR VE SP IRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
TrEMBL top hitse value%identityAlignment
A0A0A0L5A8 Uncharacterized protein1.2e-2472.29Show/hide
Query:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        MAAR  DL RIGLEGF  IEE YDRPRR+P+  AP  PQPV  + PPQR VE SP IRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
A0A0A0L7Z0 Uncharacterized protein2.6e-1158.21Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGG
        +R DL +IGLEGFA+IEE Y +  P+RRP+  A   PQ +  + PPQRM E SPPIRC+QLAK H G
Subjt:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGG
A0A5A7U5Q5 Uncharacterized protein8.9e-2875Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        AR DL RIG+E FA+IEEHYDRPRRRP+   P  PQPV  +QPP+RMVE SPPIRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGTTAGTTGAAATTTCGATTAACAAGAAGAAAATTGTGTGTTATGCCTCTTTGATAAAGATCACAAATGGGGTCAATAAAAGTATAGAGCTTTATTGTGTCAT
GGCAGCTCGTAAGGATCTCACTAGGATTGGATTGGAAGGCTTTGCCATTATAGAAGAACACTACGACCGACCGAGGAGGAGGCCGAAGCCAGGTGCTCCAGGTCAGCCGC
AACCAGTGGCAGTAGTTCAACCTCCACAAAGAATGGTTGAGCCATCGCCGCCTATTCGTTGTGATCAGTTGGCCAAAGCTCACGGAGGTATGATCATTAAAGACTGGGGC
GGAAAGCGGGTCAACAAAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGTTAGTTGAAATTTCGATTAACAAGAAGAAAATTGTGTGTTATGCCTCTTTGATAAAGATCACAAATGGGGTCAATAAAAGTATAGAGCTTTATTGTGTCAT
GGCAGCTCGTAAGGATCTCACTAGGATTGGATTGGAAGGCTTTGCCATTATAGAAGAACACTACGACCGACCGAGGAGGAGGCCGAAGCCAGGTGCTCCAGGTCAGCCGC
AACCAGTGGCAGTAGTTCAACCTCCACAAAGAATGGTTGAGCCATCGCCGCCTATTCGTTGTGATCAGTTGGCCAAAGCTCACGGAGGTATGATCATTAAAGACTGGGGC
GGAAAGCGGGTCAACAAAGCTCTTTGA
Protein sequenceShow/hide protein sequence
MDKLVEISINKKKIVCYASLIKITNGVNKSIELYCVMAARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVEPSPPIRCDQLAKAHGGMIIKDWG
GKRVNKAL