; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G08030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G08030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:6078022..6078653
RNA-Seq ExpressionClc05G08030
SyntenyClc05G08030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049530.1 hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa]2.0e-2073.4Show/hide
Query:  NPTSRACDPAATTSGNQPMKAEKNSNSKAA----AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD
        N  S A DPA+TT G QP  AEKN NSKAA    A S+NMGKALAERAVYG+QQRRTGRRRRNLIH+HG IRLLPS LS+VSLADH  NS P D
Subjt:  NPTSRACDPAATTSGNQPMKAEKNSNSKAA----AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD

KAG2726969.1 hypothetical protein I3760_01G138000 [Carya illinoinensis]9.6e-0748.28Show/hide
Query:  MSCENPTSRACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS
        M+ E   +   D  A TS NQ    +K  ++K AA +SN+GKALA+RA+YGS  RR G R+   I + G RLLPSRLSKVSL + ++
Subjt:  MSCENPTSRACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS

KAG6597562.1 hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1766.67Show/hide
Query:  MSCENPTSRACDPAAT-----TSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNSSPFD
        MS E P SR  DPA T      +GNQP K EKN +SKAAA SSN+GKALA RAVYG+Q+R TGRRR  +   HG+RLLPSRLSKVSLAD NSSP D
Subjt:  MSCENPTSRACDPAAT-----TSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNSSPFD

KAG6668024.1 hypothetical protein CIPAW_01G142300 [Carya illinoinensis]3.6e-0645.98Show/hide
Query:  MSCENPTSRACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS
        M+ E   +   D  A TS NQ    +K  ++K  A +SN+GKALA+RA+YGS  RR G R+   + + G RLLPSRLSKVSL + ++
Subjt:  MSCENPTSRACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS

KGN57150.1 hypothetical protein Csa_011148 [Cucumis sativus]1.4e-2173.47Show/hide
Query:  NPTSRACDPAATTSGNQ-PMKAEKNSNSKAA-------AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD
        N  S A DPAATT G Q P KAEKN NSKA+       A S+N+GKALAERAVYGSQQRRTGRRRRNLIH+HG  RLLPSRLSKVSLADH  NSSP D
Subjt:  NPTSRACDPAATTSGNQ-PMKAEKNSNSKAA-------AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5C0 Uncharacterized protein6.7e-2273.47Show/hide
Query:  NPTSRACDPAATTSGNQ-PMKAEKNSNSKAA-------AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD
        N  S A DPAATT G Q P KAEKN NSKA+       A S+N+GKALAERAVYGSQQRRTGRRRRNLIH+HG  RLLPSRLSKVSLADH  NSSP D
Subjt:  NPTSRACDPAATTSGNQ-PMKAEKNSNSKAA-------AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD

A0A5A7U2I2 Uncharacterized protein9.6e-2173.4Show/hide
Query:  NPTSRACDPAATTSGNQPMKAEKNSNSKAA----AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD
        N  S A DPA+TT G QP  AEKN NSKAA    A S+NMGKALAERAVYG+QQRRTGRRRRNLIH+HG IRLLPS LS+VSLADH  NS P D
Subjt:  NPTSRACDPAATTSGNQPMKAEKNSNSKAA----AVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHG-IRLLPSRLSKVSLADH--NSSPFD

A0A5C7IRA7 Uncharacterized protein1.1e-0548.35Show/hide
Query:  MSCENPTS---RACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNSS
        M  EN  S    A D  A+TS NQ ++     N+K AA +SN+GKALA RA+ GSQ RR+  R+   + + G R+LPSRLSKVSLA+ +S+
Subjt:  MSCENPTS---RACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNSS

A0A803Q4Y8 Uncharacterized protein2.2e-0448.19Show/hide
Query:  TSRACDPAATTSGNQPMK-AEKNSNSKAAAVS-SNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS
        +S+A +   +TS +Q M   EK  N+K +  S SNM KAL +RA++GS+  R G  RRN   + G+R LPSRLSKVSLAD  +
Subjt:  TSRACDPAATTSGNQPMK-AEKNSNSKAAAVS-SNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNS

B9RNI0 Uncharacterized protein2.3e-0654.41Show/hide
Query:  TSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLAD
        T GNQ   AE +SNSK        GKALA RA+YGS  RR G R+   + D+  R LPSRLS VSLAD
Subjt:  TSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATCTTCTTCATCTCAATTACCAACTCCAAGAACACCAAATAATAATGAGTTGTGAGAATCCCACTTCCAGAGCTTGCGATCCCGCCGCCACGACCAGCGGAAA
TCAACCGATGAAGGCGGAGAAAAACTCGAACTCAAAAGCCGCCGCGGTCAGCTCCAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGATCCCAACAGCGGCGGA
CCGGAAGAAGAAGAAGAAACCTCATCCATGACCATGGCATTCGACTGCTGCCTAGTAGGCTCAGCAAAGTTTCTTTAGCTGATCATAATTCCTCACCCTTTGATTAA
mRNA sequenceShow/hide mRNA sequence
CTAATGGAATCTTATGTTCCTTAACTTGTAAGAAGAGAACAAACCAAATTAGATTCCACAAACAAACATTTTTAGAAGGTGGAAGTAATGTTTCATCTTCTTCATCTCAA
TTACCAACTCCAAGAACACCAAATAATAATGAGTTGTGAGAATCCCACTTCCAGAGCTTGCGATCCCGCCGCCACGACCAGCGGAAATCAACCGATGAAGGCGGAGAAAA
ACTCGAACTCAAAAGCCGCCGCGGTCAGCTCCAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGATCCCAACAGCGGCGGACCGGAAGAAGAAGAAGAAACCTC
ATCCATGACCATGGCATTCGACTGCTGCCTAGTAGGCTCAGCAAAGTTTCTTTAGCTGATCATAATTCCTCACCCTTTGATTAATATTTGTTAATTACATACATAAATTT
GGTTAATAATATTTGTCACACTAGTTAATTAATGTGAGAGTTTGTATATGTATATGTATATGTAATATGTTAATGTATGAACATCAATTAGTGTTTATGTTTTCTAGCTC
TAATTTGCTCTTTTTCAATGTTATGATGATCAAGAACATAATTAATGCATACTTTTTAAGCATAAATATGATATTTTTTGGG
Protein sequenceShow/hide protein sequence
MFHLLHLNYQLQEHQIIMSCENPTSRACDPAATTSGNQPMKAEKNSNSKAAAVSSNMGKALAERAVYGSQQRRTGRRRRNLIHDHGIRLLPSRLSKVSLADHNSSPFD