; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G08340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G08340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationClcChr05:6409963..6415212
RNA-Seq ExpressionClc05G08340
SyntenyClc05G08340
Gene Ontology termsGO:0009865 - pollen tube adhesion (biological process)
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0753970.1 hypothetical protein [Gossypium gossypioides]1.4e-3672.12Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK+EI  E+I+++I  YANLVNLI  MK F WG+DVSIE+LHQGYTH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

MBA0812412.1 hypothetical protein [Gossypium harknessii]1.8e-3671.15Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK+EI  E+I+++I  YANLVNLI  MK F WG+DVSIE+LHQG+TH+FESTFES+EGIAEYIAHPAH+EFANLFLP+L++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

XP_006419297.1 stress-response A/B barrel domain-containing protein HS1 [Citrus clementina]3.7e-3769.44Show/hide
Query:  GKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQV
        G+D +E+KGVV H+L+AKFKE   Q+QID +I  YANLVNLI+ MK FQWG+DVSIE+LHQG+THIFESTFES EG+AEY+AHPAH+E+ANLFL  LE+V
Subjt:  GKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQV

Query:  VAVDYIPT
        + +DY PT
Subjt:  VAVDYIPT

XP_022760742.1 stress-response A/B barrel domain-containing protein HS1 [Durio zibethinus]8.1e-3772.12Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E KGVV HIL+AKFK+E T ++I+++I  YANLVNLI+ MK FQWG+DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+LE+V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

XP_039033567.1 stress-response A/B barrel domain-containing protein HS1-like [Hibiscus syriacus]1.4e-3669.23Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK++IT E+I+++ N YANLVNLI+ MK F WG+DVSIE++HQG+TH+F+STFES EG+AEYIAHPAH+EFANLFLPTL++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

TrEMBL top hitse value%identityAlignment
A0A6A2YHD3 Stress-response A/B barrel domain-containing protein6.7e-3769.23Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK++IT E+I+++ N YANLVNLI+ MK F WG+DVSIE++HQG+TH+F+STFES EG+AEYIAHPAH+EFANLFLPTL++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A6P6A7D9 stress-response A/B barrel domain-containing protein HS13.9e-3772.12Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E KGVV HIL+AKFK+E T ++I+++I  YANLVNLI+ MK FQWG+DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+LE+V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A7J9CZR3 Stress-response A/B barrel domain-containing protein6.7e-3772.12Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK+EI  E+I+++I  YANLVNLI  MK F WG+DVSIE+LHQGYTH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A7J9HRD6 Stress-response A/B barrel domain-containing protein8.8e-3771.15Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KGVV HIL+AKFK+EI  E+I+++I  YANLVNLI  MK F WG+DVSIE+LHQG+TH+FESTFES+EGIAEYIAHPAH+EFANLFLP+L++V+  D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

V4RXS1 Stress-response A/B barrel domain-containing protein1.8e-3769.44Show/hide
Query:  GKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQV
        G+D +E+KGVV H+L+AKFKE   Q+QID +I  YANLVNLI+ MK FQWG+DVSIE+LHQG+THIFESTFES EG+AEY+AHPAH+E+ANLFL  LE+V
Subjt:  GKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQV

Query:  VAVDYIPT
        + +DY PT
Subjt:  VAVDYIPT

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase2.5e-2045.36Show/hide
Query:  VMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDYIP
        V H+++ KFK+EIT+ Q ++    Y NLVN+I +MK   WG+DV+ ++  +GYTHI E TFES E I +YI HPAH+ F +++    E+++  DY P
Subjt:  VMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDYIP

P84986 Stable protein 1 (Fragments)2.9e-0563.16Show/hide
Query:  GYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQ
        GYTH FESTFESK G+ EY+   A   FA  FLPTL Q
Subjt:  GYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQ

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225806.3e-1639.36Show/hide
Query:  HILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIED-LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDY
        H+++ KFKE+    ++D+I+    NLV+ ID++K F+WG D    D L QG+TH F  TFE+K+G   + +HP H+EF+  F   ++++V +D+
Subjt:  HILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIED-LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDY

Q9LUV2 Stress-response A/B barrel domain-containing protein HS14.2e-3663.21Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KG V H+L+A FK+ ++ E+I+++I  YANLVNLI+ MK F WG+DVSIE+LHQGYTHIFESTFESKE +AEYIAHPAH+EFA +FL +L++V+ +D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPTEL
        Y PT +
Subjt:  YIPTEL

Q9SIP1 Stress-response A/B barrel domain-containing protein UP35.3e-0729.27Show/hide
Query:  RGGTVMGKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEF
        R  +VM     +S+ ++ HI++ K K++    +I  +IN   N +  +D +        +S   LH+      +TH+  S +ESKE +A Y AHP H+  
Subjt:  RGGTVMGKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEF

Query:  A-NLFLPTLEQVVAVDYIPTELP
             LP  + ++AVD+I   +P
Subjt:  A-NLFLPTLEQVVAVDYIPTELP

Arabidopsis top hitse value%identityAlignment
AT2G31670.1 Stress responsive alpha-beta barrel domain protein3.8e-0829.27Show/hide
Query:  RGGTVMGKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEF
        R  +VM     +S+ ++ HI++ K K++    +I  +IN   N +  +D +        +S   LH+      +TH+  S +ESKE +A Y AHP H+  
Subjt:  RGGTVMGKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEF

Query:  A-NLFLPTLEQVVAVDYIPTELP
             LP  + ++AVD+I   +P
Subjt:  A-NLFLPTLEQVVAVDYIPTELP

AT3G17210.1 heat stable protein 13.0e-3763.21Show/hide
Query:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD
        +E+KG V H+L+A FK+ ++ E+I+++I  YANLVNLI+ MK F WG+DVSIE+LHQGYTHIFESTFESKE +AEYIAHPAH+EFA +FL +L++V+ +D
Subjt:  KESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVD

Query:  YIPTEL
        Y PT +
Subjt:  YIPTEL

AT5G22580.1 Stress responsive A/B Barrel Domain4.5e-1739.36Show/hide
Query:  HILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIED-LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDY
        H+++ KFKE+    ++D+I+    NLV+ ID++K F+WG D    D L QG+TH F  TFE+K+G   + +HP H+EF+  F   ++++V +D+
Subjt:  HILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIED-LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQVVAVDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATGGAGGAGATGGCGAAGGGGATCACGACGATGACGACGATAGGGTAAGGAATGTCGGAGCAACAAGGAGCGAGAGTTGTCAGGACAGAGGAGGAACAGTGAT
GGGGAAAGATGGGAAAGAATCAAAAGGAGTGGTGATGCATATTTTGATAGCGAAATTCAAAGAGGAAATCACACAGGAACAAATCGACGATATCATCAATAAATATGCTA
ATCTTGTCAATCTCATTGATTCTATGAAGGTTTTTCAATGGGGAAGGGATGTTAGCATTGAAGATCTACACCAAGGTTACACTCATATCTTTGAATCCACCTTTGAGAGT
AAGGAAGGCATAGCAGAGTATATAGCTCATCCAGCACATATCGAATTTGCAAACTTGTTCCTTCCTACTTTAGAACAAGTTGTTGCTGTCGACTACATACCTACTGAATT
GCCAAAAGAGTTGTCAACTGATGACGACAACAACAATGGCGACAATGGCGACAACGGCGAGGACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATGGAGGAGATGGCGAAGGGGATCACGACGATGACGACGATAGGGTAAGGAATGTCGGAGCAACAAGGAGCGAGAGTTGTCAGGACAGAGGAGGAACAGTGAT
GGGGAAAGATGGGAAAGAATCAAAAGGAGTGGTGATGCATATTTTGATAGCGAAATTCAAAGAGGAAATCACACAGGAACAAATCGACGATATCATCAATAAATATGCTA
ATCTTGTCAATCTCATTGATTCTATGAAGGTTTTTCAATGGGGAAGGGATGTTAGCATTGAAGATCTACACCAAGGTTACACTCATATCTTTGAATCCACCTTTGAGAGT
AAGGAAGGCATAGCAGAGTATATAGCTCATCCAGCACATATCGAATTTGCAAACTTGTTCCTTCCTACTTTAGAACAAGTTGTTGCTGTCGACTACATACCTACTGAATT
GCCAAAAGAGTTGTCAACTGATGACGACAACAACAATGGCGACAATGGCGACAACGGCGAGGACGATTAATTTCGAGACTTGAGACGAAAACTATGCTTTCTTTGCTTTA
ATTAATAAATCATCGATATAAATTGTCTCTCTTTTGGAATAAATGTAACCCATTTTTACATCATTCTTGTACTAAAAGCGTTGTCTT
Protein sequenceShow/hide protein sequence
MPNGGDGEGDHDDDDDRVRNVGATRSESCQDRGGTVMGKDGKESKGVVMHILIAKFKEEITQEQIDDIINKYANLVNLIDSMKVFQWGRDVSIEDLHQGYTHIFESTFES
KEGIAEYIAHPAHIEFANLFLPTLEQVVAVDYIPTELPKELSTDDDNNNGDNGDNGEDD