; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G08610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G08610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationClcChr05:6684210..6688730
RNA-Seq ExpressionClc05G08610
SyntenyClc05G08610
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]1.6e-12693.65Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]1.4e-12592.86Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]2.5e-12290.48Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARE RMSKKGRRGFEHVP SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
         GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]6.7e-12089.29Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKSSAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARE R+SKKGRRGFEHV  SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]8.2e-12692.86Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMY+GEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein8.0e-12793.65Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X16.8e-12692.86Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X16.8e-12692.86Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARE RMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X11.2e-12290.48Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARE RMSKKGRRGFEHVP SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
         GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH7.2e-12088.89Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKSSAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIA+QNVASARE R+SKKGRRGFEHV  SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

SwissProt top hitse value%identityAlignment
O42467 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.0e-1734.36Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A        +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P AF+  I  +I+ Q+  + +    +  T +++I       
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
               +L++ V N  + DQF WD++  E+ PE+F+  LC +LG +  E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

P93045 Chromatin structure-remodeling complex protein BSH2.8e-10575.4Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARE R+SKKGRRG +H   SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A3.4e-1834.97Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I       
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
               +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.5e-1836.81Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+         + Y  + I    LE  
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        +    + +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 12.6e-1836.81Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+         + Y  + I    LE  
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        +    + +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)2.0e-10675.4Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK
        IK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARE R+SKKGRRG +H   SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)2.9e-10575.2Show/hide
Query:  MKSSASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKI
Subjt:  MKSSASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI

Query:  IPIKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPV
        IPIK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARE R+SKKGRRG +H   
Subjt:  IPIKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPV

Query:  SKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        SK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  SKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCGGCCTCACCTCACTCAAAAGCTCCGTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCAGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTCCAATCAAGCTTGAGCCAAATAATGCAATTCTG
TTTCTTTCTCAGCTTGATCTCCGAGTGAACAATACGCTTATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATG
CAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACCTGCAATTGCTTTTGCGATTAGAGAACAGCTCTATGAGATAGCAGTGCAGAATGTTGCTTCAGCAAGAGAAGGCA
GAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGG
AAAAGAAAGGACTGGGACATTTACGAACCAATTGTCGATCTTCTATCCAATGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
CGTCGATGTCGATGTTCATCTATCTTTGAAACCTCATATCCACCACATCAACGTTTCTAAATCCAATCGCGAACGATCCAATTGCAATCCCTCTAAGCTAAAAAATTTGA
AACTCCCTAAAATATAGAGAGTCGATTACAGATTCACCATGAAATCTTCGGCCTCACCTCACTCAAAAGCTCCGTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTG
CCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAA
AGATTTAAAGCTTCCTCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGA
TTATTCCAATCAAGCTTGAGCCAAATAATGCAATTCTGTTTCTTTCTCAGCTTGATCTCCGAGTGAACAATACGCTTATAAAGGATCAGTTTCTGTGGGACTTGAACAAC
TATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACCTGCAATTGCTTTTGCGATTAGAGAACAGCTCTATGA
GATAGCAGTGCAGAATGTTGCTTCAGCAAGAGAAGGCAGAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACT
TGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTCGATCTTCTATCCAATGAGGAAGTAGATGCCCTTGAA
GCAAAAGAAGAGAGAACTGCTCGATAATATATTCTCAGTTACTGCTGTTGATCATATTGCTTCTATCGTCAAACAGCGTCGGCTTTCCCAATGGAGGTAAATTATTCGAC
ACGGATAAAGTTATTGTTCTTGCTGTTTTAACACATAATTAACATAAACCTCCAAGTTAAAGGCTTTCGTACCGATTCTTCATTGATTGTTCTTAATCCCCATCTAGCTG
AAGTTCATATGGTAGATATTTTGACAAATTTTACTGTACTTGGCATGGCCTGTGTAACTAGAAAGGGGTTAGTGAGCTCTGATAATCATGAGTAGAACTTCTGATATGAG
TTCCCATTCTTATTTGTTGCTTTTGATAGCATTCTCGGAACCATTCAAAAAGGTAATTAAAGTCTGATAAGTGTAGATATT
Protein sequenceShow/hide protein sequence
MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPNNAIL
FLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASAREGRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVR
KRKDWDIYEPIVDLLSNEEVDALEAKEERTAR