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Clc05G08730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G08730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein RALF-like 32
Genome locationClcChr05:6818088..6818450
RNA-Seq ExpressionClc05G08730
SyntenyClc05G08730
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067637.1 protein RALF-like 32 [Cucumis melo var. makuwa]4.9e-5286.18Show/hide
Query:  MRRRISSKPMSSQPCFLLLLFLFL---LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGS
        MRRRISSKPMS QPCFLLLL L L   LLQDLCLVRASS HSCNGSIAECGSE+EMLMESEIS+RFL QQ+KYISIGALKKDHPACDG+ GG+PYTKSGS
Subjt:  MRRRISSKPMSSQPCFLLLLFLFL---LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGS

Query:  CAPPPTNPYNRGCSKIYRCRSDD
        CAPPP NPY+RGC KIYRCRSDD
Subjt:  CAPPPTNPYNRGCSKIYRCRSDD

KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4687.16Show/hide
Query:  SQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS
        S+ CFLL L   LL+QDLCLVRASSKHSCNGSIAECG EEE LMESEIS+RFL QQ+KYISIGALKKDHPACDG GGGQPYTKSGSCAPPP NPYNRGCS
Subjt:  SQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]2.2e-5287.5Show/hide
Query:  RRRISSKPMSSQPCFLLLLFLFL-LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP
        R+RISSKPMS Q CFLLLLFLFL L QDLCLVRASS HSCNGSIAEC +EEEMLMESEI++RFLEQQ+KYISIGALKKDHPACDG+ GGQPYT+SGSCAP
Subjt:  RRRISSKPMSSQPCFLLLLFLFL-LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP

Query:  PPTNPYNRGCSKIYRCRSDD
        PP NPYNRGCSKIYRCRSDD
Subjt:  PPTNPYNRGCSKIYRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]1.8e-4687.16Show/hide
Query:  SQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS
        S+ CFLL L   LL+QDLCLVRASSKHSCNGSIAECG EEE LMESEIS+RFLEQQ+KYISIGALKKDHPACDG GGGQPYT+SGSCAPPP NPYNRGCS
Subjt:  SQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]2.6e-5388.33Show/hide
Query:  MRRRISSKPMSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP
        MRRRISSKP+  Q CFLLL    LLLQDLCLVRA SKHSCNGSIAECGSEEEMLMESEIS+RFLEQ +KYISIGALKKDHPACDGSGGGQPYTKSGSC P
Subjt:  MRRRISSKPMSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP

Query:  PPTNPYNRGCSKIYRCRSDD
        PPTNPY RGCSKIYRCRSDD
Subjt:  PPTNPYNRGCSKIYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L624 Uncharacterized protein3.9e-3175.25Show/hide
Query:  MSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRK-YISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNR
        MS Q CFLLLLFL  LLQDLCLVR SS HSCNGSIAEC +EEEMLMESEI++RFL QQ+K YIS   LKKD PACDG+  GQPYTKSGSC P   NPYN 
Subjt:  MSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRK-YISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNR

Query:  G
        G
Subjt:  G

A0A0A0L9A8 Uncharacterized protein5.2e-5286.67Show/hide
Query:  RRRISSKPMSSQPCFLLLLFLFL-LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP
        R+RISSKPMS Q CFLLLLFLFL L QDLCLVRASS HSCNGSIA C +EEEMLMESEI++RFLEQQ+KYISIGALKKDHPACDG+ GGQPYT+SGSCAP
Subjt:  RRRISSKPMSSQPCFLLLLFLFL-LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP

Query:  PPTNPYNRGCSKIYRCRSDD
        PP NPYNRGCSKIYRCRSDD
Subjt:  PPTNPYNRGCSKIYRCRSDD

A0A5A7VKE5 Protein RALF-like 322.4e-5286.18Show/hide
Query:  MRRRISSKPMSSQPCFLLLLFLFL---LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGS
        MRRRISSKPMS QPCFLLLL L L   LLQDLCLVRASS HSCNGSIAECGSE+EMLMESEIS+RFL QQ+KYISIGALKKDHPACDG+ GG+PYTKSGS
Subjt:  MRRRISSKPMSSQPCFLLLLFLFL---LLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGS

Query:  CAPPPTNPYNRGCSKIYRCRSDD
        CAPPP NPY+RGC KIYRCRSDD
Subjt:  CAPPPTNPYNRGCSKIYRCRSDD

A0A6J1C9Y4 protein RALF-like 325.6e-4680.83Show/hide
Query:  MRRRISSKPMSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP
        MRRR+SSKP  SQP FLLLLF   LLQ LCL+RAS    CNGSIAEC +E+EMLMESEIS+RFLEQQ+KYISIGALKKD PACDGSG GQPYTKSGSC P
Subjt:  MRRRISSKPMSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAP

Query:  PPTNPYNRGCSKIYRCRSDD
        PP+NPY+RGCSKIYRCRSDD
Subjt:  PPTNPYNRGCSKIYRCRSDD

A0A6J1GXB3 protein RALF-like 321.6e-4587.74Show/hide
Query:  CFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIY
        CFLL L   LL+QDLCLVRASSKHSCNGSIAECG E+E LMESEIS+RFL QQ+KYISIGALKKDHPACDG GGGQPYTKSGSCAPPP NPYNRGCSKIY
Subjt:  CFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIY

Query:  RCRSDD
        RCRSDD
Subjt:  RCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 322.1e-1849.07Show/hide
Query:  LLLLFLFLLLQDLCLVRASSKHSCNGSIAECGS-----EEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS
        + + FL LLL  +   +ASS   CNGS+AEC S     E  ++MES  SQR  E+Q   +S GAL+++ PACDG   G+ Y  S  C PPP+NPY+RGCS
Subjt:  LLLLFLFLLLQDLCLVRASSKHSCNGSIAECGS-----EEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS

Query:  KIYRCRSD
        K YRC  D
Subjt:  KIYRCRSD

Q945T0 Rapid alkalinization factor1.8e-0946.51Show/hide
Query:  ASSKHSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS
        A S   C GSI EC   EEE  ++SE ++R L   +KYIS GAL+K+   C   G      K G+ A    NPY+RGCS I RCRS
Subjt:  ASSKHSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS

Q9LUS7 Rapid alkalinization factor 231.9e-0640Show/hide
Query:  CNGSIAEC---------------GSE--EEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR
        C G+IAEC               G E  EE  M+SEI++R L   R+YIS GAL+++   C   G      + G+ A    NPY+RGCS I RCR
Subjt:  CNGSIAEC---------------GSE--EEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR

Q9MA62 Protein RALF-like 223.7e-1046.24Show/hide
Query:  LCLVRASSK---HSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR
        L  VRA S      C GSIAEC   EEEM  +S+IS+R L  Q+KYIS GA++++   C   G      + G+ A    NPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR

Q9SRY3 Protein RALF-like 11.4e-0948.1Show/hide
Query:  CNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS
        C+GSIAEC   EE  M+SEI++R L    KYIS  +LK++   C   G      ++G+ A    NPY+RGCSKI RCRS
Subjt:  CNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 19.9e-1148.1Show/hide
Query:  CNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS
        C+GSIAEC   EE  M+SEI++R L    KYIS  +LK++   C   G      ++G+ A    NPY+RGCSKI RCRS
Subjt:  CNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRS

AT3G05490.1 ralf-like 222.6e-1146.24Show/hide
Query:  LCLVRASSK---HSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR
        L  VRA S      C GSIAEC   EEEM  +S+IS+R L  Q+KYIS GA++++   C   G      + G+ A    NPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAEC-GSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR

AT3G16570.1 rapid alkalinization factor 231.3e-0740Show/hide
Query:  CNGSIAEC---------------GSE--EEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR
        C G+IAEC               G E  EE  M+SEI++R L   R+YIS GAL+++   C   G      + G+ A    NPY+RGCS I RCR
Subjt:  CNGSIAEC---------------GSE--EEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCR

AT3G23805.1 ralf-like 246.6e-0740.51Show/hide
Query:  NGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRSD
        NG I E   E E +M SEIS+R +  +++YIS   L++D   C   G      +SG       N YNRGCS I RC  D
Subjt:  NGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCSKIYRCRSD

AT4G14010.1 ralf-like 321.5e-1949.07Show/hide
Query:  LLLLFLFLLLQDLCLVRASSKHSCNGSIAECGS-----EEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS
        + + FL LLL  +   +ASS   CNGS+AEC S     E  ++MES  SQR  E+Q   +S GAL+++ PACDG   G+ Y  S  C PPP+NPY+RGCS
Subjt:  LLLLFLFLLLQDLCLVRASSKHSCNGSIAECGS-----EEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGCS

Query:  KIYRCRSD
        K YRC  D
Subjt:  KIYRCRSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAGAATCTCAAGCAAGCCAATGTCCTCACAACCTTGCTTTCTTCTCCTTCTCTTCCTCTTCCTCCTCCTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAA
GCATTCTTGCAATGGCTCCATAGCCGAGTGTGGTAGCGAGGAGGAGATGCTGATGGAGTCGGAAATAAGTCAAAGGTTTCTTGAACAACAAAGGAAATACATCTCCATTG
GAGCTTTGAAGAAGGATCATCCAGCTTGCGATGGCAGCGGTGGCGGTCAACCATACACAAAAAGCGGAAGCTGCGCTCCGCCGCCAACCAATCCTTACAATCGAGGCTGC
TCGAAGATATATCGTTGTAGGTCTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAAGAATCTCAAGCAAGCCAATGTCCTCACAACCTTGCTTTCTTCTCCTTCTCTTCCTCTTCCTCCTCCTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAA
GCATTCTTGCAATGGCTCCATAGCCGAGTGTGGTAGCGAGGAGGAGATGCTGATGGAGTCGGAAATAAGTCAAAGGTTTCTTGAACAACAAAGGAAATACATCTCCATTG
GAGCTTTGAAGAAGGATCATCCAGCTTGCGATGGCAGCGGTGGCGGTCAACCATACACAAAAAGCGGAAGCTGCGCTCCGCCGCCAACCAATCCTTACAATCGAGGCTGC
TCGAAGATATATCGTTGTAGGTCTGATGATTGA
Protein sequenceShow/hide protein sequence
MRRRISSKPMSSQPCFLLLLFLFLLLQDLCLVRASSKHSCNGSIAECGSEEEMLMESEISQRFLEQQRKYISIGALKKDHPACDGSGGGQPYTKSGSCAPPPTNPYNRGC
SKIYRCRSDD