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Clc05G08950 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G08950
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7033550..7034511
RNA-Seq ExpressionClc05G08950
SyntenyClc05G08950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951494.1 uncharacterized protein LOC111454293 isoform X1 [Cucurbita moschata]1.3e-0541.46Show/hide
Query:  MENR--NNRKAKIRRQGTWLC--NWPPLSPLGFFEPTNPFSSLFLTSIHFPAIHAPFAPYFFFISSPFLSRFPSFQISLSVVFPLSTLLTFHQISVSRSF
        MENR     K+KIRR+G+W C  +W P  PLGFFE    F         F  I +P  P F     PFL  F S  +SLS  F    L +   +S+  S 
Subjt:  MENR--NNRKAKIRRQGTWLC--NWPPLSPLGFFEPTNPFSSLFLTSIHFPAIHAPFAPYFFFISSPFLSRFPSFQISLSVVFPLSTLLTFHQISVSRSF

Query:  FHFSATPLQARSLSHRIKNPHSS
        F        ARSL +RIKNPHSS
Subjt:  FHFSATPLQARSLSHRIKNPHSS
TrEMBL top hitse value%identityAlignment
A0A6J1GIY4 uncharacterized protein LOC111454293 isoform X16.2e-0641.46Show/hide
Query:  MENR--NNRKAKIRRQGTWLC--NWPPLSPLGFFEPTNPFSSLFLTSIHFPAIHAPFAPYFFFISSPFLSRFPSFQISLSVVFPLSTLLTFHQISVSRSF
        MENR     K+KIRR+G+W C  +W P  PLGFFE    F         F  I +P  P F     PFL  F S  +SLS  F    L +   +S+  S 
Subjt:  MENR--NNRKAKIRRQGTWLC--NWPPLSPLGFFEPTNPFSSLFLTSIHFPAIHAPFAPYFFFISSPFLSRFPSFQISLSVVFPLSTLLTFHQISVSRSF

Query:  FHFSATPLQARSLSHRIKNPHSS
        F        ARSL +RIKNPHSS
Subjt:  FHFSATPLQARSLSHRIKNPHSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATAGGAACAATAGAAAGGCTAAAATCCGGCGCCAAGGAACGTGGTTATGCAACTGGCCACCATTATCGCCACTTGGGTTCTTCGAACCGACAAATCCATTTTC
TTCTCTCTTTCTTACTAGCATTCATTTCCCCGCCATCCACGCCCCTTTTGCGCCATATTTCTTCTTCATTTCTTCTCCGTTTCTCTCTCGTTTTCCCTCTTTTCAGATCT
CTCTTTCTGTTGTGTTCCCTCTTTCCACATTACTCACATTCCACCAGATCTCTGTTTCAAGGTCCTTCTTTCACTTTTCTGCTACACCCCTTCAGGCCCGATCGCTTTCC
CATCGAATTAAGAATCCTCACTCCTCGGGTGAGGGTTTCAAAAGCTTGACTAAGAACAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
TAAATGGCAACCATAGAATTGGTAGTCTTTCTCTTTGTTCAATAATACATAGAATCCATGGAAAATAGGAACAATAGAAAGGCTAAAATCCGGCGCCAAGGAACGTGGTT
ATGCAACTGGCCACCATTATCGCCACTTGGGTTCTTCGAACCGACAAATCCATTTTCTTCTCTCTTTCTTACTAGCATTCATTTCCCCGCCATCCACGCCCCTTTTGCGC
CATATTTCTTCTTCATTTCTTCTCCGTTTCTCTCTCGTTTTCCCTCTTTTCAGATCTCTCTTTCTGTTGTGTTCCCTCTTTCCACATTACTCACATTCCACCAGATCTCT
GTTTCAAGGTCCTTCTTTCACTTTTCTGCTACACCCCTTCAGGCCCGATCGCTTTCCCATCGAATTAAGAATCCTCACTCCTCGGGTGAGGGTTTCAAAAGCTTGACTAA
GAACAGGGGATGACCTTGGGAGGAGCAAAAACTTAACTTGCTGAGGCAAAGAAGGTGTGGTGGGTTGGGGCTTTCCTATTCAGAATAGCCCATTGATGCGAGATTCCTTT
TACATATCTTTTTTTTTTTTTTTTCGTTTTGGGAA
Protein sequenceShow/hide protein sequence
MENRNNRKAKIRRQGTWLCNWPPLSPLGFFEPTNPFSSLFLTSIHFPAIHAPFAPYFFFISSPFLSRFPSFQISLSVVFPLSTLLTFHQISVSRSFFHFSATPLQARSLS
HRIKNPHSSGEGFKSLTKNRG