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Clc05G09120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7270427..7272347
RNA-Seq ExpressionClc05G09120
SyntenyClc05G09120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]6.7e-0448.65Show/hide
Query:  STTAFIA--KVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP
        S TA +A  KV F   LL+   VSAR+L    N V    R+      GV G S RLIAR+LD AWRG+Y+ PPP
Subjt:  STTAFIA--KVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0654.05Show/hide
Query:  STTAFI--AKVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP
        S +AF+   +VVFFALLLL F+VSAR+LV  TN VA    +  +ET       RRLIAR+LD +W GNY+ PPP
Subjt:  STTAFI--AKVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-0654.05Show/hide
Query:  STTAFI--AKVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP
        S +AF+   +VVFFALLLL F+VSAR+LV  TN VA    +  +ET       RRLIAR+LD +W GNY+ PPP
Subjt:  STTAFI--AKVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPP

KGN57257.1 hypothetical protein Csa_010805 [Cucumis sativus]1.8e-0956.1Show/hide
Query:  MAYSTTAFIAKVVFFALLLL-TFDVSARDLVDKTNTVAWIPRKTGMETKGV-NGRSRRLIARKLD-GAWRGNYANPPPLDST
        M +S TAFI KVV FALLLL +F+VSA + + +TN  A I  KT +E KGV N + RRLIAR+ D   W GNYA PPP + T
Subjt:  MAYSTTAFIAKVVFFALLLL-TFDVSARDLVDKTNTVAWIPRKTGMETKGV-NGRSRRLIARKLD-GAWRGNYANPPPLDST

TrEMBL top hitse value%identityAlignment
A0A0A0L9E5 Uncharacterized protein8.8e-1056.1Show/hide
Query:  MAYSTTAFIAKVVFFALLLL-TFDVSARDLVDKTNTVAWIPRKTGMETKGV-NGRSRRLIARKLD-GAWRGNYANPPPLDST
        M +S TAFI KVV FALLLL +F+VSA + + +TN  A I  KT +E KGV N + RRLIAR+ D   W GNYA PPP + T
Subjt:  MAYSTTAFIAKVVFFALLLL-TFDVSARDLVDKTNTVAWIPRKTGMETKGV-NGRSRRLIARKLD-GAWRGNYANPPPLDST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTATTAATCTTATGATCTTTAATCTGCAACCACAAATGGCTTATTCCACAACAGCTTTCATTGCTAAGGTTGTCTTCTTTGCTTTGCTACTTCTTACTTTCGA
TGTTTCCGCGAGGGATCTCGTTGATAAAACCAATACAGTGGCTTGGATACCTCGTAAGACGGGCATGGAGACGAAGGGTGTGAATGGCAGATCTAGAAGATTAATTGCTC
GAAAGTTGGATGGGGCTTGGAGGGGAAATTATGCAAACCCTCCTCCATTAGATTCCACTCTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
GCTCGTTGGCCTTCATGAAGTTTACAGAGTTGACGTCTATGGCCTTCTTAGCTTCCATGGCCGACTTTGGGAGTCGGTTGTCATGGTTCTTATTAATCTTATGATCTTTA
ATCTGCAACCACAAATGGCTTATTCCACAACAGCTTTCATTGCTAAGGTTGTCTTCTTTGCTTTGCTACTTCTTACTTTCGATGTTTCCGCGAGGGATCTCGTTGATAAA
ACCAATACAGTGGCTTGGATACCTCGTAAGACGGGCATGGAGACGAAGGGTGTGAATGGCAGATCTAGAAGATTAATTGCTCGAAAGTTGGATGGGGCTTGGAGGGGAAA
TTATGCAAACCCTCCTCCATTAGATTCCACTCTTGTTTAACGACTTCAATTTATTATTATAACTTAATAAAGTTCACTTTTTTAATAATTTTTTTAAGTCGATAGATGAT
TTAACCTAGTATCAAAAAAAAG
Protein sequenceShow/hide protein sequence
MVLINLMIFNLQPQMAYSTTAFIAKVVFFALLLLTFDVSARDLVDKTNTVAWIPRKTGMETKGVNGRSRRLIARKLDGAWRGNYANPPPLDSTLV