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Clc05G09130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7277935..7283187
RNA-Seq ExpressionClc05G09130
SyntenyClc05G09130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]9.1e-0960.29Show/hide
Query:  ASPRRISLVFNLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVSNEL
        +SP +ISL+  LLFFA LL    + VSATNN+ PLLHKP IRKM +EYK   KAVVVPKV R  S+++
Subjt:  ASPRRISLVFNLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVSNEL
KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]9.1e-0958.33Show/hide
Query:  MLSNMASPRRISLVFNLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVERGVSNE
        M   MASP RI L+  LLFF+ LLIFS VS TNN VQPL HKP IRK+ ++ K +DGKA VVP+V +  S +
Subjt:  MLSNMASPRRISLVFNLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVERGVSNE
KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]7.7e-0859.15Show/hide
Query:  MLSNMA-SPRRISLVFNLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVS
        M+S MA SP +ISL+  LLFFA LL   ++ +SATNN+ PLLHKP IRKMA+ Y+   KAVVVPKV +  S
Subjt:  MLSNMA-SPRRISLVFNLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVS
TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein5.8e-0960.29Show/hide
Query:  MASPRRISLVFNLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVERGVSNE
        MASP RI L+  LLFF+ LLIFS VS TNN VQPL HKP IRK+ ++ K +DGKA VVP+V +  S +
Subjt:  MASPRRISLVFNLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVERGVSNE
A0A0A0L8B2 Uncharacterized protein1.1e-0758.46Show/hide
Query:  ASPRRISLVFNLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVS
        +SP +ISL+  LLFFA LL   ++ +SATNN+ PLLHKP IRKMA+ Y+   KAVVVPKV +  S
Subjt:  ASPRRISLVFNLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVS
A0A5D3DJ60 Uncharacterized protein4.4e-0960.29Show/hide
Query:  ASPRRISLVFNLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVSNEL
        +SP +ISL+  LLFFA LL    + VSATNN+ PLLHKP IRKM +EYK   KAVVVPKV R  S+++
Subjt:  ASPRRISLVFNLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVSNEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAAATATGGCTTCCCCTAGGAGGATTTCCCTGGTGTTCAACCTTCTTTTCTTTGCTTTCCTTCTCATTTTCTCTATTGTTTCTGCAACCAATAACGTCCAGCC
TTTGCTTCACAAACCTCATATTCGTAAAATGGCTCTGGAGTACAAAAGTGATGGGAAGGCTGTTGTTGTTCCTAAAGTAGAGCGGGGTGTTAGCAATGAATTGGAGTTAC
AACGGATAGAAACAGAGTTCTATTGTATCAACTGGGAAAGAGAACTCCAAAAAGACAAAATTGTTGGCGCTGCCACAACACTTTTTCCCCAGAGCAGCACTGCTGGCGAC
CAACAGCAAGCGTCGCAGTGTTCTGAAGTTCTATCGCATGCATACGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCAAATATGGCTTCCCCTAGGAGGATTTCCCTGGTGTTCAACCTTCTTTTCTTTGCTTTCCTTCTCATTTTCTCTATTGTTTCTGCAACCAATAACGTCCAGCC
TTTGCTTCACAAACCTCATATTCGTAAAATGGCTCTGGAGTACAAAAGTGATGGGAAGGCTGTTGTTGTTCCTAAAGTAGAGCGGGGTGTTAGCAATGAATTGGAGTTAC
AACGGATAGAAACAGAGTTCTATTGTATCAACTGGGAAAGAGAACTCCAAAAAGACAAAATTGTTGGCGCTGCCACAACACTTTTTCCCCAGAGCAGCACTGCTGGCGAC
CAACAGCAAGCGTCGCAGTGTTCTGAAGTTCTATCGCATGCATACGCGTGA
Protein sequenceShow/hide protein sequence
MLSNMASPRRISLVFNLLFFAFLLIFSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVERGVSNELELQRIETEFYCINWERELQKDKIVGAATTLFPQSSTAGD
QQQASQCSEVLSHAYA