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Clc05G09170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7288831..7289426
RNA-Seq ExpressionClc05G09170
SyntenyClc05G09170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]9.6e-1767.47Show/hide
Query:  ASPTRISLVLKLLFFA--LLLISSTVSATNNIPLLHNPPIRKM------VGKVVAVPKVKEPTSDDVPWGGGYV--PPILINP
        +SP +ISL+LKLLFFA  L + S+TVSATNNIPLLH PPIRKM        K V VPKV  PTSDDVPWGGGYV  PPIL +P
Subjt:  ASPTRISLVLKLLFFA--LLLISSTVSATNNIPLLHNPPIRKM------VGKVVAVPKVKEPTSDDVPWGGGYV--PPILINP

KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]2.0e-1459.77Show/hide
Query:  MLSKMASPTRISLVLKLLFFALLLISSTVSATNNI--PLLHNPPIRKM-------VGKVVAVPKVKEPTSDDVPWGGGYVPPILINP
        M  KMASP RI L+LKLLFF+LLLI STVS TNN+  PL H P IRK+        GK   VP+V +PTS+D PWGGGY+ P L NP
Subjt:  MLSKMASPTRISLVLKLLFFALLLISSTVSATNNI--PLLHNPPIRKM-------VGKVVAVPKVKEPTSDDVPWGGGYVPPILINP

KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]1.6e-1668.54Show/hide
Query:  MLSKMA-SPTRISLVLKLLFFALLLI--SSTVSATNNIPLLHNPPIRKM-VG-----KVVAVPKVKEPTSDDVPWGGGYV--PPILINP
        M+SKMA SP +ISL+LKLLFFA LL    +T+SATNNIPLLH PPIRKM VG     K V VPKV +PTS D PWGGGYV  PPIL NP
Subjt:  MLSKMA-SPTRISLVLKLLFFALLLI--SSTVSATNNIPLLHNPPIRKM-VG-----KVVAVPKVKEPTSDDVPWGGGYV--PPILINP

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-1363.64Show/hide
Query:  MASP--TRISLVLKLLFFALLLISSTVSATNNIPLLHNPPIRKMVGKVVAVPK--VKEPTSDDVPWGGGYVPPILIN
        MASP   RISL+L+LLFFALLL++ST SA N+  LLHNP   KM  +   V K   K+PT+DDVPWGGGYVPPIL N
Subjt:  MASP--TRISLVLKLLFFALLLISSTVSATNNIPLLHNPPIRKMVGKVVAVPK--VKEPTSDDVPWGGGYVPPILIN

TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein4.8e-1460.24Show/hide
Query:  MASPTRISLVLKLLFFALLLISSTVSATNNI--PLLHNPPIRKM-------VGKVVAVPKVKEPTSDDVPWGGGYVPPILINP
        MASP RI L+LKLLFF+LLLI STVS TNN+  PL H P IRK+        GK   VP+V +PTS+D PWGGGY+ P L NP
Subjt:  MASPTRISLVLKLLFFALLLISSTVSATNNI--PLLHNPPIRKM-------VGKVVAVPKVKEPTSDDVPWGGGYVPPILINP

A0A0A0L8B2 Uncharacterized protein6.7e-1667.47Show/hide
Query:  ASPTRISLVLKLLFFALLLI--SSTVSATNNIPLLHNPPIRKM-VG-----KVVAVPKVKEPTSDDVPWGGGYV--PPILINP
        +SP +ISL+LKLLFFA LL    +T+SATNNIPLLH PPIRKM VG     K V VPKV +PTS D PWGGGYV  PPIL NP
Subjt:  ASPTRISLVLKLLFFALLLI--SSTVSATNNIPLLHNPPIRKM-VG-----KVVAVPKVKEPTSDDVPWGGGYV--PPILINP

A0A5D3DJ60 Uncharacterized protein4.7e-1767.47Show/hide
Query:  ASPTRISLVLKLLFFA--LLLISSTVSATNNIPLLHNPPIRKM------VGKVVAVPKVKEPTSDDVPWGGGYV--PPILINP
        +SP +ISL+LKLLFFA  L + S+TVSATNNIPLLH PPIRKM        K V VPKV  PTSDDVPWGGGYV  PPIL +P
Subjt:  ASPTRISLVLKLLFFA--LLLISSTVSATNNIPLLHNPPIRKM------VGKVVAVPKVKEPTSDDVPWGGGYV--PPILINP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAAAAATGGCTTCCCCCACCAGGATTTCACTTGTGTTGAAGCTTCTTTTCTTTGCTTTGCTTCTCATTTCCTCTACTGTTTCTGCAACCAACAACATTCCTTT
GCTCCACAACCCTCCTATTCGTAAAATGGTTGGAAAGGTTGTGGCTGTACCAAAAGTAAAGGAACCAACTTCTGATGATGTCCCATGGGGGGGAGGCTATGTTCCTCCAA
TCTTAATCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCAAAAATGGCTTCCCCCACCAGGATTTCACTTGTGTTGAAGCTTCTTTTCTTTGCTTTGCTTCTCATTTCCTCTACTGTTTCTGCAACCAACAACATTCCTTT
GCTCCACAACCCTCCTATTCGTAAAATGGTTGGAAAGGTTGTGGCTGTACCAAAAGTAAAGGAACCAACTTCTGATGATGTCCCATGGGGGGGAGGCTATGTTCCTCCAA
TCTTAATCAACCCATGA
Protein sequenceShow/hide protein sequence
MLSKMASPTRISLVLKLLFFALLLISSTVSATNNIPLLHNPPIRKMVGKVVAVPKVKEPTSDDVPWGGGYVPPILINP