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Clc05G09180 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09180
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7290220..7290556
RNA-Seq ExpressionClc05G09180
SyntenyClc05G09180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0858.02Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESLLVTKTNGVM-GRRLIVRQLDIPRKGNYSPPPPRHPPP
        MAS T LVAW+KV F   LL+A +VSARE      V  TARE  + T  NGV+ G RLI RQLD   +G+YSPPPPR PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESLLVTKTNGVM-GRRLIVRQLDIPRKGNYSPPPPRHPPP
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0958.75Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
        MAS +  V W++V+FFALLLLAFNVSARE      VA T  E  + T     +GRRLI RQLD    GNYSPPPPR PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-0858.02Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESLLVTKTNGV-MGRRLIVRQLDIPRKGNYSPPPPRHPPP
        MAS T LVAW+KV F   LL+A +VSARE      V  TARE  + T  NGV +G RLI RQLD   +G+YSPPPPR PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESLLVTKTNGV-MGRRLIVRQLDIPRKGNYSPPPPRHPPP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0857.5Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
        MAS +  V W++V+FFALLLLAFNVSARE      VA T  E  + T     +GRRLI RQLD    GNYSPPPPR  PP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]9.5e-0958.23Show/hide
Query:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPPYS
        MA+ T+  VAW+KV IFF LLLLA+N+SARE VA T  E  L T+ N V+ RRL VRQLD   +GNY PPP    PP S
Subjt:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPPYS
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein4.6e-0958.23Show/hide
Query:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPPYS
        MA+ T+  VAW+KV IFF LLLLA+N+SARE VA T  E  L T+ N V+ RRL VRQLD   +GNY PPP    PP S
Subjt:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPPYS
A0A0A0LB11 Uncharacterized protein3.6e-0657.14Show/hide
Query:  VIFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
        ++FF+LLLLAFN S    +A  ARE ++  +TN  MGR+L  RQLD   KGNYSPPPP  PPP
Subjt:  VIFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGCGAGTC
GTTGTTGGTGACGAAGACGAATGGTGTGATGGGCAGGAGATTAATTGTTCGACAGCTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCATCCTCCTC
CCTACTCCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGCGAGTC
GTTGTTGGTGACGAAGACGAATGGTGTGATGGGCAGGAGATTAATTGTTCGACAGCTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCATCCTCCTC
CCTACTCCTACTAA
Protein sequenceShow/hide protein sequence
MASTTLVAWEKVIFFALLLLAFNVSAREFVACTARESLLVTKTNGVMGRRLIVRQLDIPRKGNYSPPPPRHPPPYSY