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Clc05G09210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:7307345..7307740
RNA-Seq ExpressionClc05G09210
SyntenyClc05G09210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067665.1 hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa]1.9e-2780.49Show/hide
Query:  MARDILPFEF-GGGGGDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIVCS
        MARDILPFEF GGGGG+ ERG   GD+FFGKDDMKEYAWD VYTEETVRF+ETESA KA RKRS+R+L+ FNCFEFL+IVCS
Subjt:  MARDILPFEF-GGGGGDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIVCS

KAG6576802.1 hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2167.86Show/hide
Query:  MARDILPFEFGGGGG-----DGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV
        MARD LP+EFG GGG        +  VVGDIFFGKDDMK Y WD V+TEETVRFLETESA++  RKRSKRRL++F CFEFLK +
Subjt:  MARDILPFEFGGGGG-----DGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1061.29Show/hide
Query:  MARDILPFEFGGGGGDGER----------GHVVGDIFFGKDDMKEYAWDAVYTEETVRFLET
        MA D  PFEFGG G  G R            VVGDIFFGKDDMKEYAWD  +TE+TVRF+ET
Subjt:  MARDILPFEFGGGGGDGER----------GHVVGDIFFGKDDMKEYAWDAVYTEETVRFLET

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-1061.29Show/hide
Query:  MARDILPFEFGGGGGDGER----------GHVVGDIFFGKDDMKEYAWDAVYTEETVRFLET
        MA D  PFEFGG G  G R            VVGDIFFGKDDMKEYAWD  +TE+TVRF+ET
Subjt:  MARDILPFEFGGGGGDGER----------GHVVGDIFFGKDDMKEYAWDAVYTEETVRFLET

KGN57263.1 hypothetical protein Csa_009618 [Cucumis sativus]2.1e-2682.5Show/hide
Query:  MARDILPFEFGGGG-GDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV
        MARDILPFEFGGGG G+ ERG   GDIFFGKDDMKEYAWD VYTEETVRF+ETESA KA RKRS+R+L+ FNCFEFLKIV
Subjt:  MARDILPFEFGGGG-GDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV

TrEMBL top hitse value%identityAlignment
A0A0A0L658 Uncharacterized protein1.0e-2682.5Show/hide
Query:  MARDILPFEFGGGG-GDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV
        MARDILPFEFGGGG G+ ERG   GDIFFGKDDMKEYAWD VYTEETVRF+ETESA KA RKRS+R+L+ FNCFEFLKIV
Subjt:  MARDILPFEFGGGG-GDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIV

A0A5D3DK72 Uncharacterized protein9.3e-2880.49Show/hide
Query:  MARDILPFEF-GGGGGDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIVCS
        MARDILPFEF GGGGG+ ERG   GD+FFGKDDMKEYAWD VYTEETVRF+ETESA KA RKRS+R+L+ FNCFEFL+IVCS
Subjt:  MARDILPFEF-GGGGGDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIVCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGATATCCTTCCCTTCGAATTCGGCGGCGGCGGTGGCGACGGCGAGCGCGGCCACGTCGTCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGC
ATGGGATGCAGTTTACACGGAAGAAACAGTCCGATTCCTGGAAACAGAGTCCGCCATGAAAGCTCAGAGAAAGAGAAGCAAAAGAAGGCTACAATCATTCAATTGCTTCG
AGTTCTTGAAAATCGTCTGCTCGATGTCGATGCTCATTCCTCGAAATTTTCCGAGCAAGGAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAGATATCCTTCCCTTCGAATTCGGCGGCGGCGGTGGCGACGGCGAGCGCGGCCACGTCGTCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGC
ATGGGATGCAGTTTACACGGAAGAAACAGTCCGATTCCTGGAAACAGAGTCCGCCATGAAAGCTCAGAGAAAGAGAAGCAAAAGAAGGCTACAATCATTCAATTGCTTCG
AGTTCTTGAAAATCGTCTGCTCGATGTCGATGCTCATTCCTCGAAATTTTCCGAGCAAGGAATTGTAA
Protein sequenceShow/hide protein sequence
MARDILPFEFGGGGGDGERGHVVGDIFFGKDDMKEYAWDAVYTEETVRFLETESAMKAQRKRSKRRLQSFNCFEFLKIVCSMSMLIPRNFPSKEL