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Clc05G09370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G09370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglucose and ribitol dehydrogenase homolog 1-like
Genome locationClcChr05:7442947..7443451
RNA-Seq ExpressionClc05G09370
SyntenyClc05G09370
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576790.1 Glucose and ribitol dehydrogenase, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1559.3Show/hide
Query:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        CS+SI    S   GG  S EF      N+   RSW       VRNMASE +QFPPQKQQAQPGK+H MDPTPQFT+ DY+PANKLQ
Subjt:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

XP_008439102.1 PREDICTED: glucose and ribitol dehydrogenase homolog 1-like [Cucumis melo]9.9e-1964.04Show/hide
Query:  FCSF-SIRPPL--SCLLGGFCSVEFI-----NNNNNNTSSTRSWVRNMASEA-QQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        FCS+ +IRP +   CLLGGFC  +F      +N N++  S R WVR+MASE  QQFPPQKQQAQPGK+HAMDPTPQFT+ DY PANKLQ
Subjt:  FCSF-SIRPPL--SCLLGGFCSVEFI-----NNNNNNTSSTRSWVRNMASEA-QQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

XP_022922637.1 NADPH-dependent aldehyde reductase 1, chloroplastic-like [Cucurbita moschata]3.9e-1559.3Show/hide
Query:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        CS+SI    S   GG  S EF      N+   RSW       VRNMASE +QFPPQKQQAQPGK+H MDPTPQFT+ DY+PANKLQ
Subjt:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

XP_022985493.1 NADPH-dependent aldehyde reductase 1, chloroplastic-like [Cucurbita maxima]7.8e-1660.47Show/hide
Query:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        CS+SI    S   GGF S EF      N+   RSW       VRNMASE +QFPPQKQQAQPGK+H MDPTPQFT+ DY+PANKLQ
Subjt:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

XP_038901233.1 NADPH-dependent aldehyde reductase 1, chloroplastic-like [Benincasa hispida]3.9e-2375.61Show/hide
Query:  FCSFSI-RPPLSCLLGGFCSVEFINN-NNNNTSSTRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        FCS+S+ RPPLS LLGGF S +FI     NN+S  RSWVRNMASE QQFP QKQQAQPGKQHAMDPTP FT+ DYKPANKLQ
Subjt:  FCSFSI-RPPLSCLLGGFCSVEFINN-NNNNTSSTRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

TrEMBL top hitse value%identityAlignment
A0A1S3AYK5 glucose and ribitol dehydrogenase homolog 1-like4.8e-1964.04Show/hide
Query:  FCSF-SIRPPL--SCLLGGFCSVEFI-----NNNNNNTSSTRSWVRNMASEA-QQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        FCS+ +IRP +   CLLGGFC  +F      +N N++  S R WVR+MASE  QQFPPQKQQAQPGK+HAMDPTPQFT+ DY PANKLQ
Subjt:  FCSF-SIRPPL--SCLLGGFCSVEFI-----NNNNNNTSSTRSWVRNMASEA-QQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

A0A2H5P9V5 Uncharacterized protein1.4e-1070.59Show/hide
Query:  TRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQAPF
        TR  +RNMAS  QQFPPQKQ+AQPGK+H M+PTPQFT+ DYKP+NKL+  F
Subjt:  TRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQAPF

A0A6J1CI89 NADPH-dependent aldehyde reductase 1, chloroplastic-like1.5e-1257.5Show/hide
Query:  FCSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        FCS+S R P   L+G F       +       +   VRNMASE + FPPQKQQAQPGK+H MDPTPQFT+ DYKPANKLQ
Subjt:  FCSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

A0A6J1E3V2 NADPH-dependent aldehyde reductase 1, chloroplastic-like1.9e-1559.3Show/hide
Query:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        CS+SI    S   GG  S EF      N+   RSW       VRNMASE +QFPPQKQQAQPGK+H MDPTPQFT+ DY+PANKLQ
Subjt:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

A0A6J1JDR9 NADPH-dependent aldehyde reductase 1, chloroplastic-like3.8e-1660.47Show/hide
Query:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        CS+SI    S   GGF S EF      N+   RSW       VRNMASE +QFPPQKQQAQPGK+H MDPTPQFT+ DY+PANKLQ
Subjt:  CSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSW-------VRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

SwissProt top hitse value%identityAlignment
Q5KTS5 Glucose and ribitol dehydrogenase1.4e-0771.43Show/hide
Query:  QFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        QFPPQKQ++QPGK+H MDP+PQ  +  YKPANKLQ
Subjt:  QFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

Q75KH3 Glucose and ribitol dehydrogenase homolog9.0e-0764.86Show/hide
Query:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        +QQFPPQ Q+ QPGK+HAMDP P+     YKPANKL+
Subjt:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

Q9FZ42 NADPH-dependent aldehyde reductase 1, chloroplastic1.1e-0458.54Show/hide
Query:  MASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        MASE      QKQ AQPGK+H M+ +PQF++SDY+P+NKL+
Subjt:  MASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

Q9MA93 Glucose and ribitol dehydrogenase homolog 25.3e-0766.67Show/hide
Query:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKL
        A  FPPQKQ+ QPG QH M+PTP+F++S+YKP+NKL
Subjt:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKL

Arabidopsis top hitse value%identityAlignment
AT1G54870.1 NAD(P)-binding Rossmann-fold superfamily protein1.2e-0655.1Show/hide
Query:  STRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
        S R  +R MASE      QKQ AQPGK+H M+ +PQF++SDY+P+NKL+
Subjt:  STRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ

AT3G05260.1 NAD(P)-binding Rossmann-fold superfamily protein3.8e-0866.67Show/hide
Query:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKL
        A  FPPQKQ+ QPG QH M+PTP+F++S+YKP+NKL
Subjt:  AQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGGGTCCGGAAGTCCATAGTCTCTGGAAAACTCCCTCTCTCCGCCTCTGTCTCCGAAGACGTACGTGTCCGCCGCAAGCCAATGTTCTGTTCTTTCTCCATTCG
ACCTCCTCTTTCTTGTTTGTTGGGTGGGTTTTGCAGTGTTGAGTTTATTAATAATAATAATAATAATACTTCCAGTACGCGTAGTTGGGTGAGAAATATGGCATCTGAGG
CCCAACAGTTTCCTCCACAGAAGCAACAAGCTCAACCTGGCAAACAGCACGCCATGGACCCGACTCCACAGTTCACTACCTCAGATTATAAGCCTGCCAATAAGCTTCAG
GCACCCTTTCTCTCTCTTTCCCTTCTTCCTACTTCACTCTCCTTAATATCATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGGGTCCGGAAGTCCATAGTCTCTGGAAAACTCCCTCTCTCCGCCTCTGTCTCCGAAGACGTACGTGTCCGCCGCAAGCCAATGTTCTGTTCTTTCTCCATTCG
ACCTCCTCTTTCTTGTTTGTTGGGTGGGTTTTGCAGTGTTGAGTTTATTAATAATAATAATAATAATACTTCCAGTACGCGTAGTTGGGTGAGAAATATGGCATCTGAGG
CCCAACAGTTTCCTCCACAGAAGCAACAAGCTCAACCTGGCAAACAGCACGCCATGGACCCGACTCCACAGTTCACTACCTCAGATTATAAGCCTGCCAATAAGCTTCAG
GCACCCTTTCTCTCTCTTTCCCTTCTTCCTACTTCACTCTCCTTAATATCATACTAA
Protein sequenceShow/hide protein sequence
MGRVRKSIVSGKLPLSASVSEDVRVRRKPMFCSFSIRPPLSCLLGGFCSVEFINNNNNNTSSTRSWVRNMASEAQQFPPQKQQAQPGKQHAMDPTPQFTTSDYKPANKLQ
APFLSLSLLPTSLSLISY