; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G10140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G10140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationClcChr05:8189158..8189933
RNA-Seq ExpressionClc05G10140
SyntenyClc05G10140
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033636.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]6.7e-7176.22Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCGDIN AF LF+KIGKKDVFFWNVMLKSLALHG+A DALKLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKE++IRP+       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                      D +     EADVAIWGALLGGCKLRGDFKRAGEIVER RKLRS EGGIHVS SNMYASVE W EAV AR K
Subjt:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

KAE8650456.1 hypothetical protein Csa_011365 [Cucumis sativus]6.7e-7176.22Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCGDIN AF LF+KIGKKDVFFWNVMLKSLALHG+A DALKLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKE++IRP+       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                      D +     EADVAIWGALLGGCKLRGDFKRAGEIVER RKLRS EGGIHVS SNMYASVE W EAV AR K
Subjt:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

XP_004140846.2 pentatricopeptide repeat-containing protein At3g29230 [Cucumis sativus]6.7e-7176.22Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCGDIN AF LF+KIGKKDVFFWNVMLKSLALHG+A DALKLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKE++IRP+       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                      D +     EADVAIWGALLGGCKLRGDFKRAGEIVER RKLRS EGGIHVS SNMYASVE W EAV AR K
Subjt:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

XP_023541409.1 pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita pepo subsp. pepo]1.5e-6773.51Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCGDIN AFT+F+KIG KDVF WNVMLKSLALHGKA DA+KL SLMQKEGLKPNDFTFLGALFACSHGGM EEGQ IFD M+KEH I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ------------------QDAIEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                          Q   E DVAIWGALLGGCKLR DFKRA EIVERVRKLRSNEGGIHVSLSNMYASVEHW EA+TAR K
Subjt:  ------------------QDAIEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

XP_038890585.1 pentatricopeptide repeat-containing protein At3g29230-like [Benincasa hispida]1.8e-7176.76Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCGD++ AF LF+KIGKKDV+FWNVMLKSLALHGKA DALKLFSLMQKEGLKPN+FTFLGALFACSHGGMVEEGQTIFDMMEKE+ IRP        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                  ++A+        EADVAIWGALLGGCKLRGDFKRA EIVER  KLRSNEGGIHVSLSNMYASVEHWPEAVTAR K
Subjt:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

TrEMBL top hitse value%identityAlignment
A0A0A0L9R7 Uncharacterized protein3.2e-7176.22Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCGDIN AF LF+KIGKKDVFFWNVMLKSLALHG+A DALKLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKE++IRP+       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                      D +     EADVAIWGALLGGCKLRGDFKRAGEIVER RKLRS EGGIHVS SNMYASVE W EAV AR K
Subjt:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

A0A5D3DH88 Pentatricopeptide repeat-containing protein3.2e-7176.22Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCGDIN AF LF+KIGKKDVFFWNVMLKSLALHG+A DALKLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKE++IRP+       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                      D +     EADVAIWGALLGGCKLRGDFKRAGEIVER RKLRS EGGIHVS SNMYASVE W EAV AR K
Subjt:  --------------DAI-----EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

A0A6J1CIY5 pentatricopeptide repeat-containing protein At3g29230-like2.4e-6672.43Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCGDIN AF LF+KIG KDVF WNVMLKSLALHGK+ DA+KLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQ+IFD MEKE  I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                  ++A+        E DVAIWGALLGGCKLR DFKRAGEIVER  KLRSNEGGIH SLSNMYAS+EHWPEA+ AR K
Subjt:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

A0A6J1FZ38 pentatricopeptide repeat-containing protein At3g29230-like1.8e-6672.43Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCGDIN AFT+F+KIG KDVF WNVMLKSLALHGKA DA+KL  LMQKEGLKPNDFTFLGALFACSHGGM EEGQ IFD M+KEH I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ------------------QDAIEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                          Q   E DVAIWGALLGGCKL  DFKRA EIVERVRKLRSNEGGIHVSLSNMYASVEHW EA+TAR K
Subjt:  ------------------QDAIEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

A0A6J1HXE5 pentatricopeptide repeat-containing protein At3g29230-like5.4e-6671.35Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCGDIN AFT+F+KIG KDVF WNVMLKSLALHGKA DA+KL SLMQKEGLKPNDFTFLGALFACSHGGM EEGQ IFD M+KEH I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                  ++A+        E D+AIWGALLGGCKLR DFKRA +IVERVRKLRS EGGIHVSLSNMYASVEHW EA++AR K
Subjt:  ----------QDAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

SwissProt top hitse value%identityAlignment
O23337 Pentatricopeptide repeat-containing protein At4g148201.1e-2832.47Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCG ++    +F K+ +++V  W+ M+ +L++HG+A DAL LF+ M++E ++PN+ TF+G L+ CSH G+VEEG+ IF  M  E+ I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGRGQYFEE
                  ++A+E        ++V IWG+L+  C++ G+ +      +R+ +L  +  G  V +SN+YA  + W +    R        F+E
Subjt:  ----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGRGQYFEE

Q9LS72 Pentatricopeptide repeat-containing protein At3g292306.0e-3036.76Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCG++  AF +F  I KKD+  WN ML  L +HG   +A++LFS M++EG++P+  TF+  L +C+H G+++EG   F  MEK + + PQ       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  -----------DAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                   +AI        E +V IWGALLG C++  +   A E+++ + KL   + G +  LSN+YA+ E W      R K
Subjt:  -----------DAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic1.6e-2734.04Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCG +  A  LF  I  KD+  W VM+    +HG   +A+ LF+ M++ G++ ++ +F+  L+ACSH G+V+EG   F++M  E +I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------DAIEA-----------DVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGR
                D I+A           D  IWGALL GC++  D K A ++ E+V +L     G +V ++N+YA  E W +    R + G+
Subjt:  --------DAIEA-----------DVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGR

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic6.6e-2939.08Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQDA----
        MY+KCG +  A  +F    +KD+  WN M+   A+HG + DAL+LF+ MQ   GL+P D TF+G L AC+H G+V EG  IF+ M +E+ I+P+      
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQDA----

Query:  ----------------------IEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASV
                              ++AD  +W ++LG CKL GDF    EI E +  L     GI+V LSN+YASV
Subjt:  ----------------------IEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASV

Q9ZUT4 Pentatricopeptide repeat-containing protein At2g373209.5e-2837.5Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQ-KEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP-------
        MY KCGD+  AF +F +   KDV  WN M+   A HG A  A++LF LM  K G KP+  T+LG L +C H G+V+EG+  F++M  EH ++P       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQ-KEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP-------

Query:  -----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTAR
                   Q+A+E         +  IWG+LL  C++ GD        E    L  +    HV L+N+YASV +W EA T R
Subjt:  -----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTAR

Arabidopsis top hitse value%identityAlignment
AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.8e-2937.5Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQ-KEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP-------
        MY KCGD+  AF +F +   KDV  WN M+   A HG A  A++LF LM  K G KP+  T+LG L +C H G+V+EG+  F++M  EH ++P       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQ-KEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP-------

Query:  -----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTAR
                   Q+A+E         +  IWG+LL  C++ GD        E    L  +    HV L+N+YASV +W EA T R
Subjt:  -----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTAR

AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.2e-3136.76Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCG++  AF +F  I KKD+  WN ML  L +HG   +A++LFS M++EG++P+  TF+  L +C+H G+++EG   F  MEK + + PQ       
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  -----------DAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK
                   +AI        E +V IWGALLG C++  +   A E+++ + KL   + G +  LSN+YA+ E W      R K
Subjt:  -----------DAI--------EADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGK

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein8.0e-3032.47Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------
        MYAKCG ++    +F K+ +++V  W+ M+ +L++HG+A DAL LF+ M++E ++PN+ TF+G L+ CSH G+VEEG+ IF  M  E+ I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRP--------

Query:  ----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGRGQYFEE
                  ++A+E        ++V IWG+L+  C++ G+ +      +R+ +L  +  G  V +SN+YA  + W +    R        F+E
Subjt:  ----------QDAIE--------ADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGRGQYFEE

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-2834.04Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------
        MYAKCG +  A  LF  I  KD+  W VM+    +HG   +A+ LF+ M++ G++ ++ +F+  L+ACSH G+V+EG   F++M  E +I P        
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQ-------

Query:  --------DAIEA-----------DVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGR
                D I+A           D  IWGALL GC++  D K A ++ E+V +L     G +V ++N+YA  E W +    R + G+
Subjt:  --------DAIEA-----------DVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGR

AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.7e-3039.08Show/hide
Query:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQDA----
        MY+KCG +  A  +F    +KD+  WN M+   A+HG + DAL+LF+ MQ   GL+P D TF+G L AC+H G+V EG  IF+ M +E+ I+P+      
Subjt:  MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQDA----

Query:  ----------------------IEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASV
                              ++AD  +W ++LG CKL GDF    EI E +  L     GI+V LSN+YASV
Subjt:  ----------------------IEADVAIWGALLGGCKLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCAAAATGTGGAGACATCAACACAGCTTTTACTCTTTTCATGAAAATAGGAAAGAAAGACGTGTTTTTTTGGAATGTTATGCTGAAATCACTTGCCCTCCATGG
AAAGGCTCCAGATGCTCTTAAATTATTCTCTTTGATGCAGAAAGAAGGGCTGAAGCCAAACGACTTCACCTTTCTTGGAGCTTTGTTTGCGTGCAGCCATGGAGGGATGG
TGGAAGAAGGTCAGACCATATTTGACATGATGGAGAAGGAACATAGGATCAGACCACAAGATGCCATTGAGGCTGATGTTGCAATATGGGGAGCTTTGTTGGGTGGTTGC
AAGTTAAGAGGTGATTTCAAGAGAGCAGGAGAAATAGTTGAGAGGGTGAGGAAATTGAGATCAAATGAAGGTGGAATCCATGTGAGCTTGTCGAACATGTATGCATCAGT
TGAGCACTGGCCAGAGGCTGTAACAGCAAGGGGCAAAAATGGAAGAGGACAATATTTTGAAGAAGACTGGCCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGCAAAATGTGGAGACATCAACACAGCTTTTACTCTTTTCATGAAAATAGGAAAGAAAGACGTGTTTTTTTGGAATGTTATGCTGAAATCACTTGCCCTCCATGG
AAAGGCTCCAGATGCTCTTAAATTATTCTCTTTGATGCAGAAAGAAGGGCTGAAGCCAAACGACTTCACCTTTCTTGGAGCTTTGTTTGCGTGCAGCCATGGAGGGATGG
TGGAAGAAGGTCAGACCATATTTGACATGATGGAGAAGGAACATAGGATCAGACCACAAGATGCCATTGAGGCTGATGTTGCAATATGGGGAGCTTTGTTGGGTGGTTGC
AAGTTAAGAGGTGATTTCAAGAGAGCAGGAGAAATAGTTGAGAGGGTGAGGAAATTGAGATCAAATGAAGGTGGAATCCATGTGAGCTTGTCGAACATGTATGCATCAGT
TGAGCACTGGCCAGAGGCTGTAACAGCAAGGGGCAAAAATGGAAGAGGACAATATTTTGAAGAAGACTGGCCAGAGTAGTGTTATTTATGCGCCTAGTGGAAGCTCATCG
TTTATAAAATATTTTCAAGATGATAAACAACTTTAACATTTATTTCTACTTTTTAATCAACTCCAAAGTAAACTTTTTTCTTTTGATTGAATTTTGTCCTTGTCATTGAG
ATTTTTTTAATGGATGACCTCTTTTTGGAGGCAAAATAA
Protein sequenceShow/hide protein sequence
MYAKCGDINTAFTLFMKIGKKDVFFWNVMLKSLALHGKAPDALKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEHRIRPQDAIEADVAIWGALLGGC
KLRGDFKRAGEIVERVRKLRSNEGGIHVSLSNMYASVEHWPEAVTARGKNGRGQYFEEDWPE