; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G10150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G10150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationClcChr05:8190188..8191126
RNA-Seq ExpressionClc05G10150
SyntenyClc05G10150
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033636.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.0e-9386.46Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGWFWDGKKVHCRILKTGFSLN SVSDALFNLYV FS+ +GP D  DGMASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMI RYTS G V GA+KLF+TMEDRDTVSWNTM+SGYIKVGEVMKARELFE+MPEKNVVSWT MI AYAKAGDL TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

XP_004140846.2 pentatricopeptide repeat-containing protein At3g29230 [Cucumis sativus]4.8e-9488.02Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP  QSVSLYGDLLQRGLKPH+FTYPFVL SCADLGWFWDGKKVHCRILKTGFSLN SVSDALF+LYV FS+ +GP D  DGMASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMI RYTSTG V GA+KLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFE+MPEKNVVSWT MI AYAKAGDL TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

XP_008439399.1 PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like [Cucumis melo]7.0e-9386.46Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGWFWDGKKVHCRILKTGFSLN SVSDALFNLYV FS+ +GP D  DGMASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMI RYTS G V GA+KLF+TMEDRDTVSWNTM+SGYIKVGEVMKARELFE+MPEKNVVSWT MI AYAKAGDL TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

XP_022968218.1 pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita maxima]1.5e-8779.69Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        M+RGYAFNGPVE+SVSLYG+LLQRGLKPHNFTYP+VLNSCADLGWFWDGKKVHCRI+KTGFSLNCSVSDAL NLY+K SE SGPG V+DG   DARK+FD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM  R++E WNRMI  Y  TG V GAR+LF++MEDRD VSWNTMISGY+KV +V+KARELFE+MPEKN+VSWT MIGAYAKAGD++TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

XP_038890585.1 pentatricopeptide repeat-containing protein At3g29230-like [Benincasa hispida]5.5e-9892.71Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGPVEQSVSLYG LLQRGLKPHN TY FVLNSCADLGWFWDGKKVHCRILK+GFSLNCSVS ALFNLYVK SE SGPGDVTDG+ASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMISRYTSTG VDGARKLF+TMEDRDTVSWNTMISGYIKVGEVMKARELFEQM EKNVVSWT MIGAYAKAGDLVTARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

TrEMBL top hitse value%identityAlignment
A0A1S3AZC1 pentatricopeptide repeat-containing protein At3g29230-like3.4e-9386.46Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGWFWDGKKVHCRILKTGFSLN SVSDALFNLYV FS+ +GP D  DGMASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMI RYTS G V GA+KLF+TMEDRDTVSWNTM+SGYIKVGEVMKARELFE+MPEKNVVSWT MI AYAKAGDL TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

A0A5D3DH88 Pentatricopeptide repeat-containing protein3.4e-9386.46Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGWFWDGKKVHCRILKTGFSLN SVSDALFNLYV FS+ +GP D  DGMASDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VRSVE WNRMI RYTS G V GA+KLF+TMEDRDTVSWNTM+SGYIKVGEVMKARELFE+MPEKNVVSWT MI AYAKAGDL TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

A0A6J1CIY5 pentatricopeptide repeat-containing protein At3g29230-like1.2e-7774.48Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGP E+ VSLY +LLQRGLKPHNFTYPFVLNSC DLG F DG+ VHCRILKTGFS + SVS+AL NLY+K  E  GPG VT G  SDARKVFD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM VR+VE  NRM++ YTS G V+ AR+LF+ MEDRD ++WNTMISGY+KV EV+KARELFE++PE NVVSWTLMIG YAKAGDL+TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

A0A6J1FZ38 pentatricopeptide repeat-containing protein At3g29230-like4.0e-8679.17Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        MIRGYAFNGPVE+S SLYG+LLQRGLKPHNFTYP+VLNSCADLGWFWDGKKVHCRI+KTGFSLN SVSDAL NLY+K SE SGPG V+DG   DARK+FD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM  R++E WNRMI  Y  TG V GAR+LF++MEDRD VSWNTMISGY+KV +V KARELFE+MPEKN+VSWT MIGAYAKAGD++TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

A0A6J1HXE5 pentatricopeptide repeat-containing protein At3g29230-like7.3e-8879.69Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        M+RGYAFNGPVE+SVSLYG+LLQRGLKPHNFTYP+VLNSCADLGWFWDGKKVHCRI+KTGFSLNCSVSDAL NLY+K SE SGPG V+DG   DARK+FD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        EM  R++E WNRMI  Y  TG V GAR+LF++MEDRD VSWNTMISGY+KV +V+KARELFE+MPEKN+VSWT MIGAYAKAGD++TARMFF
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

SwissProt top hitse value%identityAlignment
O49399 Pentatricopeptide repeat-containing protein At4g188406.0e-3137.16Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IR YA +   E +++++ ++L   + P  +++ FVL +CA    F +G+++H   +K+G   +  V + L N+Y +            G    ARKV D
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG
         M VR   +WN ++S Y   G VD AR LF+ ME+R+  SWN MISGY   G V +A+E+F+ MP ++VVSW  M+ AYA  G
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG

Q9FHR3 Putative pentatricopeptide repeat-containing protein At5g375707.4e-2931.61Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGL-KPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVF
        +I+GY+      ++VS+   +++ GL +P  +T+P V+  C++ G    G  VH  +L+ GF  +  V  +  + Y K  +              ARKVF
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGL-KPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVF

Query:  DEMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
         EM  R+  +W  ++  Y  +G ++ A+ +F+ M +R+  SWN ++ G +K G+++ A++LF++MP+++++S+T MI  YAK GD+V+AR  F
Subjt:  DEMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

Q9LS72 Pentatricopeptide repeat-containing protein At3g292303.1e-3540.1Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IR +A N    Q+  ++ ++ + GL   NFTYPF+L +C+   W    K +H  I K G S +  V +AL + Y   S   G G        DA K+F+
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        +MS R   +WN M+      G +  AR+LF+ M  RD +SWNTM+ GY +  E+ KA ELFE+MPE+N VSW+ M+  Y+KAGD+  AR+ F
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

Q9LXF2 Pentatricopeptide repeat-containing protein At5g153009.6e-2937.16Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        ++RG A +   E++VSLY ++ +RG+ P  +T+ FVL +C+ L W  +G   H ++++ GF LN  V +AL   +      +  GD+  G+AS+   +FD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG
        + +     AW+ M S Y   G +D A +LF+ M  +D V+WN MI+G +K  E+  ARELF++  EK+VV+W  MI  Y   G
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG

Q9MAT2 Pentatricopeptide repeat-containing protein At1g048403.3e-2936.98Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IRG   N   E SV  +  +L+ G+KP   T+PFVL S + LG+ W G+ +H   LK     +  V  +L ++Y K            G    A +VF+
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVR----SVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTA
        E   R    S+  WN +I+ Y     +  A  LF +M +R++ SW+T+I GY+  GE+ +A++LFE MPEKNVVSWT +I  +++ GD  TA
Subjt:  EMSVR----SVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTA

Arabidopsis top hitse value%identityAlignment
AT1G04840.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-3036.98Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IRG   N   E SV  +  +L+ G+KP   T+PFVL S + LG+ W G+ +H   LK     +  V  +L ++Y K            G    A +VF+
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVR----SVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTA
        E   R    S+  WN +I+ Y     +  A  LF +M +R++ SW+T+I GY+  GE+ +A++LFE MPEKNVVSWT +I  +++ GD  TA
Subjt:  EMSVR----SVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTA

AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-3640.1Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IR +A N    Q+  ++ ++ + GL   NFTYPF+L +C+   W    K +H  I K G S +  V +AL + Y   S   G G        DA K+F+
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
        +MS R   +WN M+      G +  AR+LF+ M  RD +SWNTM+ GY +  E+ KA ELFE+MPE+N VSW+ M+  Y+KAGD+  AR+ F
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.3e-3237.16Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        +IR YA +   E +++++ ++L   + P  +++ FVL +CA    F +G+++H   +K+G   +  V + L N+Y +            G    ARKV D
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG
         M VR   +WN ++S Y   G VD AR LF+ ME+R+  SWN MISGY   G V +A+E+F+ MP ++VVSW  M+ AYA  G
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG

AT5G15300.1 Pentatricopeptide repeat (PPR) superfamily protein6.8e-3037.16Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD
        ++RG A +   E++VSLY ++ +RG+ P  +T+ FVL +C+ L W  +G   H ++++ GF LN  V +AL   +      +  GD+  G+AS+   +FD
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFD

Query:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG
        + +     AW+ M S Y   G +D A +LF+ M  +D V+WN MI+G +K  E+  ARELF++  EK+VV+W  MI  Y   G
Subjt:  EMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAG

AT5G37570.1 Pentatricopeptide repeat (PPR-like) superfamily protein5.2e-3031.61Show/hide
Query:  MIRGYAFNGPVEQSVSLYGDLLQRGL-KPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVF
        +I+GY+      ++VS+   +++ GL +P  +T+P V+  C++ G    G  VH  +L+ GF  +  V  +  + Y K  +              ARKVF
Subjt:  MIRGYAFNGPVEQSVSLYGDLLQRGL-KPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVF

Query:  DEMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF
         EM  R+  +W  ++  Y  +G ++ A+ +F+ M +R+  SWN ++ G +K G+++ A++LF++MP+++++S+T MI  YAK GD+V+AR  F
Subjt:  DEMSVRSVEAWNRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAGGTTACGCTTTCAATGGCCCTGTTGAGCAATCTGTGTCCTTGTATGGCGATTTGCTTCAAAGAGGGCTCAAACCCCATAATTTCACCTACCCATTTGTGCT
AAACTCGTGTGCTGATTTGGGTTGGTTCTGGGATGGAAAAAAAGTGCATTGTCGAATTCTCAAGACTGGATTTTCGTTGAATTGTTCAGTTTCTGATGCGCTTTTTAATT
TATATGTGAAATTTTCAGAATCTTCTGGACCTGGGGATGTTACTGATGGGATGGCGTCTGATGCTCGCAAGGTGTTCGATGAAATGTCTGTTAGATCTGTTGAAGCATGG
AACCGAATGATCTCAAGGTATACGAGTACTGGAGGTGTTGATGGTGCACGGAAGTTGTTTAATACAATGGAAGATCGAGATACTGTCTCGTGGAATACAATGATTTCTGG
TTATATAAAGGTAGGAGAGGTAATGAAAGCAAGAGAGTTATTTGAACAAATGCCAGAGAAGAATGTCGTGTCTTGGACTTTGATGATTGGGGCTTATGCCAAAGCTGGAG
ACCTTGTTACAGCAAGAATGTTCTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAACGGCTCGAAAGATCTTCAAAAGAGGTAACCCTAACCTACAAAAAGTTGTAAGAAATTATTATGGTTTGTTTTATTTTAATAGCTATAGAAGACGATCTGTTGCAC
AACAGCAGTTGTAAATGATGAATGGCCATGAACTTGGAGCCCAAAATTTCAGAGCTATTACCAAGATGCAACTTTGCGCAGCTCAAACAAATCCACGCTCTCCTCTTAAC
AACTTCCATTCACCAAAACATCCATATTTCCTCGAGCTTTCTTCGACGAACCACCGAATTCGGGACCATGGACTACGCAAGTCTCGTGTTTTTTTCATCTCAATCCCACT
TTCAAAACCGAAATTCAATTCTGGAACGCAATGATCAGAGGTTACGCTTTCAATGGCCCTGTTGAGCAATCTGTGTCCTTGTATGGCGATTTGCTTCAAAGAGGGCTCAA
ACCCCATAATTTCACCTACCCATTTGTGCTAAACTCGTGTGCTGATTTGGGTTGGTTCTGGGATGGAAAAAAAGTGCATTGTCGAATTCTCAAGACTGGATTTTCGTTGA
ATTGTTCAGTTTCTGATGCGCTTTTTAATTTATATGTGAAATTTTCAGAATCTTCTGGACCTGGGGATGTTACTGATGGGATGGCGTCTGATGCTCGCAAGGTGTTCGAT
GAAATGTCTGTTAGATCTGTTGAAGCATGGAACCGAATGATCTCAAGGTATACGAGTACTGGAGGTGTTGATGGTGCACGGAAGTTGTTTAATACAATGGAAGATCGAGA
TACTGTCTCGTGGAATACAATGATTTCTGGTTATATAAAGGTAGGAGAGGTAATGAAAGCAAGAGAGTTATTTGAACAAATGCCAGAGAAGAATGTCGTGTCTTGGACTT
TGATGATTGGGGCTTATGCCAAAGCTGGAGACCTTGTTACAGCAAGAATGTTCTTTTAA
Protein sequenceShow/hide protein sequence
MIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWFWDGKKVHCRILKTGFSLNCSVSDALFNLYVKFSESSGPGDVTDGMASDARKVFDEMSVRSVEAW
NRMISRYTSTGGVDGARKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEQMPEKNVVSWTLMIGAYAKAGDLVTARMFF