; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G10250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G10250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionActin-depolymerizing factor
Genome locationClcChr05:8242542..8244100
RNA-Seq ExpressionClc05G10250
SyntenyClc05G10250
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003779 - actin binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033654.1 zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]2.9e-6999.26Show/hide
Query:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
        AN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
Subjt:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY

Query:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

XP_008439227.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo]2.9e-6999.26Show/hide
Query:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
        AN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
Subjt:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY

Query:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

XP_022141136.1 uncharacterized protein LOC111011601 [Momordica charantia]5.5e-6896.35Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MANSASGMAVRDECKLKF+ELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS+VRNKMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

XP_031738809.1 actin-depolymerizing factor 7 [Cucumis sativus]6.5e-6997.81Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETYDDF+AAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

XP_038886312.1 uncharacterized protein LOC120076526 [Benincasa hispida]2.9e-6998.54Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MANSASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

TrEMBL top hitse value%identityAlignment
A0A0A0LBE8 ADF-H domain-containing protein3.2e-6997.81Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETYDDF+AAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

A0A1S3AY90 LOW QUALITY PROTEIN: uncharacterized protein LOC1034840781.4e-6999.26Show/hide
Query:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
        AN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
Subjt:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY

Query:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

A0A5A7SR44 Zinc finger CCHC domain-containing protein 91.4e-6999.26Show/hide
Query:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
        AN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY
Subjt:  ANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVY

Query:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  ASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

A0A5D3DH64 Zinc finger CCHC domain-containing protein 91.1e-66100Show/hide
Query:  MAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDR
        MAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDR
Subjt:  MAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

A0A6J1CI48 uncharacterized protein LOC1110116012.7e-6896.35Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MANSASGMAVRDECKLKF+ELKAKRNYRFIIFKIENQEVVVEKLGSPEETY+DFTAAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS+VRNKMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

SwissProt top hitse value%identityAlignment
P30175 Actin-depolymerizing factor4.0e-6182.01Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK
        MANS+SGMAV DECKLKF+ELKAKRN+RFI+FKIE   Q+V VE+LG P E+YDDFT  +P NECRYAVFDFDF TDENCQKSKIFFI+WSPDTS+VR+K
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
        M+YAS+KDRFKRELDGIQVELQATDPSEMS DIIKARAF
Subjt:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

Q67ZM4 Actin-depolymerizing factor 72.7e-6588.24Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETYDDFTA++PANECRYAVFDFDF TDENCQKSKIFFIAWSPD+S+VR KMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA

Q7XSN9 Actin-depolymerizing factor 69.8e-6081.88Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIE--NQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK
        MANSASGMAV DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TYDDFTA++PA+ECRYAVFDFDF TDENCQKSKIFFI+WSPDTSKVR+K
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIE--NQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA
        M+YASSKDRFKRELDGIQVELQATDPSEMS DI+KARA
Subjt:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA

Q8LFH6 Actin-depolymerizing factor 122.3e-6185.29Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAV DECKLKFLELKAKRNYRFIIF+I+ Q+VVVEKLGSP+E YDDFT  +P NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S+VR KMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATDPSEMS DIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA

Q9LQ81 Actin-depolymerizing factor 107.5e-6081.75Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK
        MANSASGM V DECKLKFLELKAKRNYRFI+FKI+   Q+V+++KLG+PEETY+DFT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS+VR+K
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR
        M+YASSKDRFKRELDGIQVELQATDPSEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR

Arabidopsis top hitse value%identityAlignment
AT1G01750.1 actin depolymerizing factor 115.3e-6181.75Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK
        MANSASGM V DECKLKFLELKAKRNYRFI+FKI+   Q+V+++KLG+PEETY+DFT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS+VR+K
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR
        M+YASSKDRFKRELDGIQVELQATDPSEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR

AT3G46000.1 actin depolymerizing factor 23.2e-5874.07Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAV D+CKLKF+ELKAKR +R I++KIE+++V+VEKLG PE++YDDF A++PA++CRY ++DFDF T ENCQKSKIFFIAWSPDT+KVR+KM+
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR
        YASSKDRFKRELDGIQVELQATDP+EM  D+ K+R
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR

AT4G00680.1 actin depolymerizing factor 82.0e-6080.29Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK
        MANSASGM V DECK+KFLELKAKR YRFI+FKI+   Q+V +EKLG+PEETYDDFT++IP +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS+VR+K
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR
        M+YASSKDRFKRE++GIQVELQATDPSEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKAR

AT4G25590.1 actin depolymerizing factor 71.9e-6688.24Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETYDDFTA++PANECRYAVFDFDF TDENCQKSKIFFIAWSPD+S+VR KMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATDPSEMSFDIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA

AT5G52360.1 actin depolymerizing factor 101.7e-6285.29Show/hide
Query:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV
        MAN+ASGMAV DECKLKFLELKAKRNYRFIIF+I+ Q+VVVEKLGSP+E YDDFT  +P NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S+VR KMV
Subjt:  MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATDPSEMS DIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDPSEMSFDIIKARA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggcgaactctgcatctggaatggctgtgagagatgaatgcaaactgaaatttttggagttaaaagccaagagaaactatcgattcattatattcaagattgagaacca
agaagttgtcgtggagaaacttggaagccctgaagagacttatgatgatttcactgccgctattcctgctaatgagtgtcgctatgctgtctttgactttgatttcacta
ctgatgagaattgccagaaaagcaagattttcttcatagcatggtcacccgacacatcaaaagtgagaaataagatggtttatgcaagctccaaggacagattcaagagg
gaattggatggaattcaggtggaattgcaagccacagatcctagcgaaatgagctttgacataatcaaagctcgagctttttaa
mRNA sequenceShow/hide mRNA sequence
tctcttttcttccaccattattcttcccctccatttttccctctctcatactcattcttcgtacacaaaaatggcgaactctgcatctggaatggctgtgagagatgaat
gcaaactgaaatttttggagttaaaagccaagagaaactatcgattcattatattcaagattgagaaccaagaagttgtcgtggagaaacttggaagccctgaagagact
tatgatgatttcactgccgctattcctgctaatgagtgtcgctatgctgtctttgactttgatttcactactgatgagaattgccagaaaagcaagattttcttcatagc
atggtcacccgacacatcaaaagtgagaaataagatggtttatgcaagctccaaggacagattcaagagggaattggatggaattcaggtggaattgcaagccacagatc
ctagcgaaatgagctttgacataatcaaagctcgagctttttaa
Protein sequenceShow/hide protein sequence
MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKR
ELDGIQVELQATDPSEMSFDIIKARAF