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Clc05G10380 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G10380
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRemorin-like
Genome locationClcChr05:8311768..8312218
RNA-Seq ExpressionClc05G10380
SyntenyClc05G10380
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0010033 - response to organic substance (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033641.1 remorin-like [Cucumis melo var. makuwa]8.9e-1780.3Show/hide
Query:  AGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND
        A L KLRLKEMEKVKNKEAETHKAVESKKASIEAKRE +K +VE++A  HR TNT+P KCFGICND
Subjt:  AGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND

KAF5732350.1 Remorin family protein [Tripterygium wilfordii]6.0e-1348.91Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC
        RA+R+LA TE W+  KKA+LEA+ K+I+   E L+ K++E++KNKEA   K ++ +KA+IEA+RE+   +VE+KA+K+R++N+ P K FG C
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC

KGN57373.1 hypothetical protein Csa_010046 [Cucumis sativus]5.0e-2879.79Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND
        +AER+LASTE WK++KKAALEAEVKKIDA L KLRL+ MEKVKNKEAETHKAVESKKASIEAKRE +K +VE KA  HR TNT+P KCFGICND
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND

XP_004140777.2 remorin [Cucumis sativus]2.8e-1872.41Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTK
        +AER+LASTE WK++KKAALEAEVKKIDA L KLRL+ MEKVKNKEAETHKAVESKKASIEAKRE +K +VE KA   +S   +P +
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTK

XP_017973082.1 PREDICTED: remorin-like [Theobroma cacao]7.8e-1350Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC
        +A+RK+A T+ W+   KA  EA+ K I+   EKL+  ++E++KNKEA+  K V  KKASIEA+RE+ K  +++KA K+R+TNT+P  CFGIC
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC

TrEMBL top hitse value%identityAlignment
A0A0A0L6I9 Remorin_C domain-containing protein2.4e-2879.79Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND
        +AER+LASTE WK++KKAALEAEVKKIDA L KLRL+ MEKVKNKEAETHKAVESKKASIEAKRE +K +VE KA  HR TNT+P KCFGICND
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND

A0A2K1YDD2 Remorin_C domain-containing protein3.2e-1246.81Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND
        +A+R L+  + W+   K + EA+  KI+A LE +R  + EK+KN+EA+  KA+E KKA+I+A+ +++   + EKA KHRS NT+P KCFGIC D
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND

A0A5B6VLT6 Remorin-like2.4e-1250Show/hide
Query:  LCRAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC
        L RA++KL+S   W++TKKAA+EA++K+I+  LEK + + +EK+KNK A  HK  E KKA +EAKR +   + EE AAK+R+T T P K  G C
Subjt:  LCRAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC

A0A5D3DHT0 Remorin-like4.3e-1780.3Show/hide
Query:  AGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND
        A L KLRLKEMEKVKNKEAETHKAVESKKASIEAKRE +K +VE++A  HR TNT+P KCFGICND
Subjt:  AGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGICND

A0A7J7CE28 Remorin family protein2.9e-1348.91Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC
        RA+R+LA TE W+  KKA+LEA+ K+I+   E L+ K++E++KNKEA   K ++ +KA+IEA+RE+   +VE+KA+K+R++N+ P K FG C
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGIC

SwissProt top hitse value%identityAlignment
O80837 Remorin1.7e-1041.11Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        RA++K++    W+++KKAA+EA+++KI+  LEK + +  EK+KNK A  HK  E K+A +EAK+ ++  + EE  AK+R+T  +P    G
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

P93788 Remorin8.9e-1247.25Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGI
        +A++K+++   W+++KKA LEAE+KK++  LEK + +  EK+KNK A  HK  E K+A IEAKR +   + EE AAK+R+T T P K  GI
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFGI

Q9FFA5 Remorin 1.41.6e-1350Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        +AE+KL+S   W++ KKAA+EAE+KK++  LEK + + +E++KNK A+ HK  E K+A IEAKR ++  + EE AAK+R+T T P K FG
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

Q9M2D8 Uncharacterized protein At3g612602.6e-1144.44Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        +AE+K+A    W+++KKAA+EA++KKI+  LEK + +  E++KNK A  HK  E ++A IEAKR +   + EE AAK+R+T  +P    G
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

Arabidopsis top hitse value%identityAlignment
AT2G45820.1 Remorin family protein1.2e-1141.11Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        RA++K++    W+++KKAA+EA+++KI+  LEK + +  EK+KNK A  HK  E K+A +EAK+ ++  + EE  AK+R+T  +P    G
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

AT3G48940.1 Remorin family protein3.4e-1440.17Show/hide
Query:  EGDSKIKITPKYPNVPYTKVKCLYKLCRAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEE
        E D +I +   +     +KV+      +A++K++S   W+++KKA++EAE+KKI+  L K +    E++KNK A+ HK  E K+A  EAKR +   + EE
Subjt:  EGDSKIKITPKYPNVPYTKVKCLYKLCRAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEE

Query:  KAAKHRSTNTIPTKCFG
         AAK+R+T T PTK FG
Subjt:  KAAKHRSTNTIPTKCFG

AT3G61260.1 Remorin family protein1.8e-1244.44Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        +AE+K+A    W+++KKAA+EA++KKI+  LEK + +  E++KNK A  HK  E ++A IEAKR +   + EE AAK+R+T  +P    G
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

AT5G23750.1 Remorin family protein1.2e-1450Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        +AE+KL+S   W++ KKAA+EAE+KK++  LEK + + +E++KNK A+ HK  E K+A IEAKR ++  + EE AAK+R+T T P K FG
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG

AT5G23750.2 Remorin family protein1.2e-1450Show/hide
Query:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG
        +AE+KL+S   W++ KKAA+EAE+KK++  LEK + + +E++KNK A+ HK  E K+A IEAKR ++  + EE AAK+R+T T P K FG
Subjt:  RAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRSTNTIPTKCFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGGGTGATTCTAAAATTAAAATCACTCCAAAATATCCAAACGTACCTTACACTAAGGTAAAGTGTTTGTATAAATTGTGCAGAGCTGAAAGGAAGTTGGCTTC
TACTGAGGTATGGAAGAGCACAAAGAAAGCTGCTTTGGAAGCCGAAGTGAAGAAGATAGATGCTGGGTTGGAGAAGTTGAGATTAAAGGAGATGGAGAAGGTTAAAAACA
AAGAGGCTGAGACCCATAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAAAAGAGAGCAGCAAAAACAAAGGGTTGAAGAGAAAGCTGCCAAGCATAGATCTACC
AATACAATTCCAACTAAGTGTTTTGGCATTTGCAATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGGGTGATTCTAAAATTAAAATCACTCCAAAATATCCAAACGTACCTTACACTAAGGTAAAGTGTTTGTATAAATTGTGCAGAGCTGAAAGGAAGTTGGCTTC
TACTGAGGTATGGAAGAGCACAAAGAAAGCTGCTTTGGAAGCCGAAGTGAAGAAGATAGATGCTGGGTTGGAGAAGTTGAGATTAAAGGAGATGGAGAAGGTTAAAAACA
AAGAGGCTGAGACCCATAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAAAAGAGAGCAGCAAAAACAAAGGGTTGAAGAGAAAGCTGCCAAGCATAGATCTACC
AATACAATTCCAACTAAGTGTTTTGGCATTTGCAATGACTGA
Protein sequenceShow/hide protein sequence
MFEGDSKIKITPKYPNVPYTKVKCLYKLCRAERKLASTEVWKSTKKAALEAEVKKIDAGLEKLRLKEMEKVKNKEAETHKAVESKKASIEAKREQQKQRVEEKAAKHRST
NTIPTKCFGICND