; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G10840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G10840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationClcChr05:8742191..8744977
RNA-Seq ExpressionClc05G10840
SyntenyClc05G10840
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.9e-15489.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]7.0e-15588.85Show/hide
Query:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT
        LS FL A   MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT
Subjt:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT

Query:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGV
        VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLES+PRIFFHKMISLYYD+AMH+KLFEVFADMEELGV
Subjt:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGV

Query:  QPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDE
        QPNMAIVT VGNVF ELGMLDKY+KLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNSNN  SE  KMEHSST  ++EAEITSE+SSLEDDE+MSEDPDE
Subjt:  QPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDE

Query:  ILDDECMSKESNFEHDFMGFGQL
        IL+DE M  +SNFEHDFMG GQL
Subjt:  ILDDECMSKESNFEHDFMGFGQL

XP_008439301.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]1.0e-15389.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]5.9e-16293.61Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNM IVTMV
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GNVFHELGMLDKYEKLM+KYPPPKWEYRYIKGKRVRIRSKYLYENGN NN  S+ DKMEHSSTK LEEAEITSE+++LEDD EMSEDP+EI  DECMSKE
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
         NFEHDFMGFGQL
Subjt:  SNFEHDFMGFGQL

XP_038888233.1 pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Benincasa hispida]5.9e-16293.61Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNM IVTMV
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GNVFHELGMLDKYEKLM+KYPPPKWEYRYIKGKRVRIRSKYLYENGN NN  S+ DKMEHSSTK LEEAEITSE+++LEDD EMSEDP+EI  DECMSKE
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
         NFEHDFMGFGQL
Subjt:  SNFEHDFMGFGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein3.4e-15588.85Show/hide
Query:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT
        LS FL A   MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT
Subjt:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT

Query:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGV
        VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLES+PRIFFHKMISLYYD+AMH+KLFEVFADMEELGV
Subjt:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGV

Query:  QPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDE
        QPNMAIVT VGNVF ELGMLDKY+KLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNSNN  SE  KMEHSST  ++EAEITSE+SSLEDDE+MSEDPDE
Subjt:  QPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDE

Query:  ILDDECMSKESNFEHDFMGFGQL
        IL+DE M  +SNFEHDFMG GQL
Subjt:  ILDDECMSKESNFEHDFMGFGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X24.9e-15489.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X12.4e-15385.33Show/hide
Query:  LPVKLSLFLVLSIFLNACVW-MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
        L + +S+   L IF   C + MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
Subjt:  LPVKLSLFLVLSIFLNACVW-MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF

Query:  IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLF
        IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLF
Subjt:  IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLF

Query:  EVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLE
        EVFADMEELGVQPNMAIVT VGN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLE
Subjt:  EVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLE

Query:  DDEEMSEDPDEILDDECMSKESNFEHDFMGFGQL
        DDEE+ +DPDEIL+DE M  +SNFEHDFMG GQL
Subjt:  DDEEMSEDPDEILDDECMSKESNFEHDFMGFGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein4.9e-15489.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein2.9e-15489.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLM+KYPPPKWEYRYIKGKRV+IR+KYL ENGNS N  SE +KMEHSST  L+EAEITSE+SSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic5.2e-4446.08Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++R+Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211901.3e-10063.46Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV

Query:  TMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYE-NGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEIL---D
        +MVG VF +L M DKYEKLM+KYPPP+WE+RYIKG+RV++++K L E +      SS+ DK+++         EI SE    ED  E  ED  E+L    
Subjt:  TMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYE-NGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEIL---D

Query:  DECMSKESNFEH
         +  S+E + +H
Subjt:  DECMSKESNFEH

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-4546.08Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++R+Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein3.7e-4546.08Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++R+Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein3.7e-4546.08Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++R+Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein3.7e-4546.08Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++R+Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein9.6e-10263.46Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV

Query:  TMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYE-NGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEIL---D
        +MVG VF +L M DKYEKLM+KYPPP+WE+RYIKG+RV++++K L E +      SS+ DK+++         EI SE    ED  E  ED  E+L    
Subjt:  TMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYE-NGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEIL---D

Query:  DECMSKESNFEH
         +  S+E + +H
Subjt:  DECMSKESNFEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTATTTTCACTTCTTTCTTCAATGACTCACTTTATAGCCCAAGCATCGCTCTCGTCCTCCTCGGCTTCCTACCGGTAAAGCTCTCCCTTTTTCTCGTTCTATC
TATCTTTCTCAACGCTTGTGTTTGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAACGGATAGAATCTGTTAAATTTTCCTGGTGTGCAAGCAGTTCAGTTG
TATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTG
TCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTTGAGTTTCCTCTTATTACTGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAG
AGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTGGCTGAAGATGGAAGAC
TTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCTATGCAC
AACAAGTTATTTGAGGTATTTGCTGATATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAA
ATACGAAAAACTGATGAGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCA
ACAATTGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGTTGGAGGAAGCTGAAATAACCTCCGAGAATTCCAGTCTTGAAGATGATGAGGAAATGAGC
GAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTATTTTCACTTCTTTCTTCAATGACTCACTTTATAGCCCAAGCATCGCTCTCGTCCTCCTCGGCTTCCTACCGGTAAAGCTCTCCCTTTTTCTCGTTCTATC
TATCTTTCTCAACGCTTGTGTTTGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAACGGATAGAATCTGTTAAATTTTCCTGGTGTGCAAGCAGTTCAGTTG
TATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTG
TCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTTGAGTTTCCTCTTATTACTGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAG
AGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTGGCTGAAGATGGAAGAC
TTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCTATGCAC
AACAAGTTATTTGAGGTATTTGCTGATATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAA
ATACGAAAAACTGATGAGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCA
ACAATTGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGTTGGAGGAAGCTGAAATAACCTCCGAGAATTCCAGTCTTGAAGATGATGAGGAAATGAGC
GAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAAATATATATACGTATTGTAGTTCG
CAGTTGAAGTTCGTCATAGTGTAGACTTTCATTTTTATTATTATTAGTTTGTAATTTGAACAGACGGGATGACGCATTGTGATCATAGAGCCAATTCTCTTTATTTCAGC
CTTCAGTATTATAATCCCTGATTTAACAAATGGCCCAAGTTTGTGTAAACGGTGGGGATCACTTCTCTTTTTATTGACTAATTATGGTGGGTA
Protein sequenceShow/hide protein sequence
MQIIFTSFFNDSLYSPSIALVLLGFLPVKLSLFLVLSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGL
SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMH
NKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMS
EDPDEILDDECMSKESNFEHDFMGFGQL