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Clc05G12130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G12130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:10026288..10027250
RNA-Seq ExpressionClc05G12130
SyntenyClc05G12130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648586.1 hypothetical protein Csa_008875 [Cucumis sativus]4.9e-0768.18Show/hide
Query:  MVQDHVGCVHLVGLKFIPRCLEVKLLEAMTICFGLENLSSIYVL
        ++QDH G V LVG KF+ RC EV+LLEAMTICFGL+N+SSI++L
Subjt:  MVQDHVGCVHLVGLKFIPRCLEVKLLEAMTICFGLENLSSIYVL
XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]1.6e-1360.49Show/hide
Query:  DHVGCVHLVGLKFIPRCLEVKLLEAMTICFGLENLSSIYVLNILVESNYL-EVINLLNDGAVDLTEFSFLIEETKNRGDEL
        DH+  V + GLKF+ RC +V +LEA+ ICFGLE LSSI + NI+VES+ L EVINLLND  VDL+E SF  EE K+RG  L
Subjt:  DHVGCVHLVGLKFIPRCLEVKLLEAMTICFGLENLSSIYVLNILVESNYL-EVINLLNDGAVDLTEFSFLIEETKNRGDEL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACAAGATCACGTGGGTTGTGTGCATTTGGTTGGATTGAAGTTTATCCCTAGATGCTTGGAGGTGAAGCTTCTTGAAGCTATGACGATATGCTTTGGACTTGAGAA
CCTATCTTCCATCTATGTTTTGAATATCTTGGTTGAGTCTAATTATTTAGAGGTCATCAATTTGTTGAACGATGGTGCTGTTGATTTGACTGAATTCTCCTTCCTTATCG
AGGAGACAAAGAATAGAGGCGATGAGTTGAGGGATCGTTCCTCCACGGCCGAAATTAGAATCAACCTGTCGTCGTCCGTCCTTCGCTCGCTTTCTCCTCCTCCTCTTCTT
CTCTCTCTCGGGACCTCCATTTCTGAGGAAAATTTTATAGTTTCAGGTTTTTTTCTTGTTGTTTCTGGGATTTCCATGGAAGTTTCGTTATGTTCAATGCTACCAACATT
CAAGCTCTGCCCTTCTACTGGTTGTTGTTGCTGTTGCTGTTGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACAAGATCACGTGGGTTGTGTGCATTTGGTTGGATTGAAGTTTATCCCTAGATGCTTGGAGGTGAAGCTTCTTGAAGCTATGACGATATGCTTTGGACTTGAGAA
CCTATCTTCCATCTATGTTTTGAATATCTTGGTTGAGTCTAATTATTTAGAGGTCATCAATTTGTTGAACGATGGTGCTGTTGATTTGACTGAATTCTCCTTCCTTATCG
AGGAGACAAAGAATAGAGGCGATGAGTTGAGGGATCGTTCCTCCACGGCCGAAATTAGAATCAACCTGTCGTCGTCCGTCCTTCGCTCGCTTTCTCCTCCTCCTCTTCTT
CTCTCTCTCGGGACCTCCATTTCTGAGGAAAATTTTATAGTTTCAGGTTTTTTTCTTGTTGTTTCTGGGATTTCCATGGAAGTTTCGTTATGTTCAATGCTACCAACATT
CAAGCTCTGCCCTTCTACTGGTTGTTGTTGCTGTTGCTGTTGTTCCTGA
Protein sequenceShow/hide protein sequence
MVQDHVGCVHLVGLKFIPRCLEVKLLEAMTICFGLENLSSIYVLNILVESNYLEVINLLNDGAVDLTEFSFLIEETKNRGDELRDRSSTAEIRINLSSSVLRSLSPPPLL
LSLGTSISEENFIVSGFFLVVSGISMEVSLCSMLPTFKLCPSTGCCCCCCCS