CuGenDBv2

Gene ID	Clc05G12295
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Fe2OG dioxygenase domain-containing protein
Genome location	ClcChr05:10257531..10258402
RNA-Seq Expression	Clc05G12295
Synteny	Clc05G12295
Gene Ontology terms	GO:0006402 - mRNA catabolic process (biological process) GO:0070988 - demethylation (biological process) GO:0003729 - mRNA binding (molecular function) GO:0032451 - demethylase activity (molecular function)
InterPro domains	IPR037151 - Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily IPR044842 - RNA demethylase ALKBH9B/ALKBH10B-like

Homology

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GenBank top hits

e value

%identity

Alignment

KHG27343.1 putative alpha-ketoglutarate-dependent dioxygenase ABH5 [Gossypium arboreum]

1.2e-39

62.5

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMV+W +LP+ CVP+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F + L+I SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFR+MD+ KLPY+FLPD EL RIKP  +S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

PIA24823.1 hypothetical protein AQUCO_22100001v1 [Aquilegia coerulea]

3.2e-40

64.71

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKR+VKW ILPSTC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F + L+I +PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFRKMDD KLP+RFLPD ELQ I+PL  S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

PIA30177.1 hypothetical protein AQUCO_05700108v1 [Aquilegia coerulea]

3.2e-40

64.71

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKR+VKW ILPSTC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F + L+I +PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFRKMDD KLP+RFLPD ELQ I+PL  S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

XP_022149186.1 RNA demethylase ALKBH5-like [Momordica charantia]

7.4e-61

59.92

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMVKW ILP TCVPDSCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F +RLEI SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEW---QEEEKNVELEESETKQSD----YSPKPLESLSQRQEEEKKNVQVK----KQRGHHNYDS
            ISITFRKMDDRKLPYRFLPDLELQRIKPL+LS++    EEE+ V+ E+ E KQ D    +SP PL+ L+Q QEEE+KNV+VK    KQR H++Y S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEW---QEEEKNVELEESETKQSD----YSPKPLESLSQRQEEEKKNVQVK----KQRGHHNYDS

Query:  ---------VKEEMN------EREQRDHHQYYYSPNPSPQQTKRQRFQVGVY
                  KEE N      E +QR HH  YY+P  S Q++KRQR++VG++
Subjt:  ---------VKEEMN------EREQRDHHQYYYSPNPSPQQTKRQRFQVGVY

XP_039013190.1 RNA demethylase ALKBH9B-like [Hibiscus syriacus]

7.2e-40

63.97

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMV+W ILP TC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F   L+I SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFR+MDD KLPY+F PD EL RIKPL +S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

TrEMBL top hits

e value

%identity

Alignment

A0A2G5C0M3 Fe2OG dioxygenase domain-containing protein

1.6e-40

64.71

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKR+VKW ILPSTC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F + L+I +PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFRKMDD KLP+RFLPD ELQ I+PL  S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

A0A2G5CH57 Fe2OG dioxygenase domain-containing protein

1.6e-40

64.71

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKR+VKW ILPSTC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F + L+I +PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFRKMDD KLP+RFLPD ELQ I+PL  S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

A0A2P5WEQ1 Fe2OG dioxygenase domain-containing protein

5.9e-40

62.5

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMV+W +LP+ CVP+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F + L+I SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFR+MD+ KLPY+FLPD EL RIKP  +S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

A0A6A2ZN70 Phosphatidylinositol-4-phosphate 5-kinase 8-like

3.5e-40

63.97

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMV+W ILP TC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F   L+I SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS
            ISITFR+MDD KLPY+F PD EL RIKPL +S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLS

A0A6J1D7M0 RNA demethylase ALKBH5-like

3.6e-61

59.92

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        MIKRMVKW ILP TCVPDSCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTESNI+F +RLEI SPGEF GPVSIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEW---QEEEKNVELEESETKQSD----YSPKPLESLSQRQEEEKKNVQVK----KQRGHHNYDS
            ISITFRKMDDRKLPYRFLPDLELQRIKPL+LS++    EEE+ V+ E+ E KQ D    +SP PL+ L+Q QEEE+KNV+VK    KQR H++Y S
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEW---QEEEKNVELEESETKQSD----YSPKPLESLSQRQEEEKKNVQVK----KQRGHHNYDS

Query:  ---------VKEEMN------EREQRDHHQYYYSPNPSPQQTKRQRFQVGVY
                  KEE N      E +QR HH  YY+P  S Q++KRQR++VG++
Subjt:  ---------VKEEMN------EREQRDHHQYYYSPNPSPQQTKRQRFQVGVY

SwissProt top hits

e value

%identity

Alignment

Q9SL49 RNA demethylase ALKBH9B

4.2e-35

52.59

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +I++++KW +LP TCVPDSCIVNIYDEGDC PPHI +HDFLRPFCT+SFL+E +I+F + L++  PG+F G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL
            ISITFRKMD+ K P  F P+ +LQ I+PL L
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL

Q9ZT92 RNA demethylase ALKBH10B

3.5e-05

26.74

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKGISITFR
        +I   V W ++P    P+ C++N ++EG+ + P +      +P  T+  L+ES + +   L   + G F GP+++ L +G  +  R
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKGISITFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

3.0e-36

52.59

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +I++++KW +LP TCVPDSCIVNIYDEGDC PPHI +HDFLRPFCT+SFL+E +I+F + L++  PG+F G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL
            ISITFRKMD+ K P  F P+ +LQ I+PL L
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL

AT2G17970.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

3.0e-36

52.59

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +I++++KW +LP TCVPDSCIVNIYDEGDC PPHI +HDFLRPFCT+SFL+E +I+F + L++  PG+F G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL
            ISITFRKMD+ K P  F P+ +LQ I+PL L
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL

AT2G17970.3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

3.0e-36

52.59

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +I++++KW +LP TCVPDSCIVNIYDEGDC PPHI +HDFLRPFCT+SFL+E +I+F + L++  PG+F G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL
            ISITFRKMD+ K P  F P+ +LQ I+PL L
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPLDL

AT4G36090.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein

6.7e-36

54.89

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +IKR+V W +LP TCVPDSCIVNIY+E DC PPHI +HDFLRPFCTVSFL+E NI+F + L++  PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPL
            ISITFRKMD+ K P  F P+ +L+ IKPL
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPL

AT4G36090.3 oxidoreductase, 2OG-Fe(II) oxygenase family protein

6.7e-36

54.89

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Query:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------
        +IKR+V W +LP TCVPDSCIVNIY+E DC PPHI +HDFLRPFCTVSFL+E NI+F + L++  PGEF G  SIPLP G                    
Subjt:  MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKG--------------------

Query:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPL
            ISITFRKMD+ K P  F P+ +L+ IKPL
Subjt:  ----ISITFRKMDDRKLPYRFLPDLELQRIKPL

Sequences

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CDS sequence

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ATGATCAAGAGAATGGTGAAGTGGCTGATTCTACCCAGTACATGTGTCCCCGATAGCTGCATTGTAAACATATACGACGAAGGAGATTGCACTCCTCCACATATTCATCA
CCATGACTTTCTAAGACCCTTTTGCACTGTATCATTTCTAACAGAAAGCAACATCATATTTGCCACTCGACTTGAAATCCCAAGTCCTGGAGAGTTCTGTGGTCCTGTCT
CCATTCCTTTGCCTAAAGGGATCTCGATCACATTCCGAAAAATGGATGACAGGAAACTTCCATACAGGTTTCTGCCTGATCTTGAACTTCAAAGAATCAAGCCGCTGGAC
TTATCTGAATGGCAAGAGGAAGAGAAGAATGTTGAACTGGAGGAAAGTGAAACTAAACAAAGTGATTATTCACCCAAGCCACTGGAATCATTATCCCAACGGCAAGAGGA
GGAAAAGAAGAATGTTCAAGTGAAAAAACAGAGGGGCCATCACAATTATGATTCAGTGAAGGAAGAGATGAATGAAAGGGAACAGAGAGACCATCATCAATATTATTATT
CACCCAACCCATCCCCTCAACAAACCAAACGTCAGAGATTCCAAGTTGGTGTCTACTGA

mRNA sequence

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Protein sequence

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MIKRMVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKGISITFRKMDDRKLPYRFLPDLELQRIKPLD
LSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNVQVKKQRGHHNYDSVKEEMNEREQRDHHQYYYSPNPSPQQTKRQRFQVGVY

Clc05G12295 (gene) of Watermelon (cordophanus) v2 genome